Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Gm9682-201ENSMUST00000197505 556 ntBASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8n-2A0A075B633 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Mir1895-201ENSMUST00000122615 79 ntBASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Gm6257-201ENSMUST00000163864 910 ntBASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Gm44872-201ENSMUST00000207864 420 ntBASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8n-2A0A075B633 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Gm44492-201ENSMUST00000197012 141 ntBASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Gm8396-201ENSMUST00000057361 823 ntBASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8n-2A0A075B633 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms