RNA–Protein interactions for RNA: ENST00000333602.11

TNK2-201, Transcript of tyrosine kinase non receptor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNK2, Length 5,270 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNK2-201ENST00000333602 SF3B1O75533 1304 aaKnown RBP eCLIP27.83■■■□□ 2.052e-6■■■■■ 85.2
TNK2-201ENST00000333602 UTP3Q9NQZ2 479 aaKnown RBP eCLIP32.45■■■□□ 2.791e-6■■■■■ 83.9
TNK2-201ENST00000333602 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP29.28■■■□□ 2.283e-7■■■■■ 69.2
TNK2-201ENST00000333602 AARSP49588 968 aaKnown RBP eCLIP29.1■■■□□ 2.251e-6■■■■■ 45.8
TNK2-201ENST00000333602 GTF2F1P35269 517 aaKnown RBP eCLIP31.53■■■□□ 2.642e-7■■■■■ 45.2
TNK2-201ENST00000333602 DDX6P26196 483 aaKnown RBP eCLIP26.95■■□□□ 1.918e-8■■■■■ 42
TNK2-201ENST00000333602 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.29■■□□□ 1.82e-6■■■■■ 38.3
TNK2-201ENST00000333602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.37■■■□□ 2.132e-6■■■■■ 34.3
TNK2-201ENST00000333602 PCBP2Q15366 365 aaKnown RBP eCLIP26.66■■□□□ 1.867e-7■■■■■ 31.9
TNK2-201ENST00000333602 FKBP4Q02790 459 aaKnown RBP eCLIP32.47■■■□□ 2.791e-6■■■■■ 31.1
TNK2-201ENST00000333602 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP26.07■■□□□ 1.764e-7■■■■■ 30.9
TNK2-201ENST00000333602 SF3B4Q15427 424 aaKnown RBP eCLIP25.65■■□□□ 1.73e-8■■■■■ 30.6
TNK2-201ENST00000333602 RBM15Q96T37 977 aaKnown RBP eCLIP29.05■■■□□ 2.246e-7■■■■■ 27.7
TNK2-201ENST00000333602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.61■■■□□ 2.815e-8■■■■■ 27.3
TNK2-201ENST00000333602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.55■■■□□ 2.161e-6■■■■■ 27.3
TNK2-201ENST00000333602 NONOQ15233 471 aaKnown RBP eCLIP30.75■■■□□ 2.517e-7■■■■□ 26.3
TNK2-201ENST00000333602 DDX3XO00571 662 aaKnown RBP eCLIP28.28■■■□□ 2.124e-6■■■■□ 26.3
TNK2-201ENST00000333602 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.73■■■□□ 2.834e-7■■■■□ 25.6
TNK2-201ENST00000333602 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.76■■■□□ 2.194e-7■■■■□ 25.6
TNK2-201ENST00000333602 SLTMQ9NWH9 1034 aaKnown RBP eCLIP31.35■■■□□ 2.616e-7■■■■□ 25.5
TNK2-201ENST00000333602 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.66■■■□□ 2.021e-7■■■■□ 25.2
TNK2-201ENST00000333602 LSM11P83369 360 aaKnown RBP eCLIP24.2■■□□□ 1.471e-7■■■■□ 24.5
TNK2-201ENST00000333602 EWSR1Q01844 656 aaKnown RBP eCLIP24.16■■□□□ 1.468e-7■■■■□ 23.6
TNK2-201ENST00000333602 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.39■■□□□ 1.824e-7■■■■□ 22.7
TNK2-201ENST00000333602 HNRNPMP52272 730 aaKnown RBP eCLIP34.41■■■■□ 3.12e-6■■■■□ 22
TNK2-201ENST00000333602 NCBP2P52298 156 aaKnown RBP eCLIP26.92■■□□□ 1.95e-8■■■■□ 21.7
TNK2-201ENST00000333602 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.02■■□□□ 1.121e-7■■■■□ 20.3
TNK2-201ENST00000333602 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP27.27■■□□□ 1.962e-7■■■■□ 20.1
TNK2-201ENST00000333602 XRCC6P12956 609 aaKnown RBP eCLIP31.54■■■□□ 2.644e-6■■■■□ 19.6
TNK2-201ENST00000333602 SAFB2Q14151 953 aaKnown RBP eCLIP34.92■■■■□ 3.184e-6■■■□□ 19
TNK2-201ENST00000333602 FUSP35637 526 aaKnown RBP eCLIP21.16■□□□□ 0.983e-11■■■□□ 18.5
TNK2-201ENST00000333602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.64■■■□□ 2.341e-6■■■□□ 18.4
TNK2-201ENST00000333602 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.63■■■□□ 2.179e-7■■■□□ 18.2
TNK2-201ENST00000333602 GPKOWQ92917 476 aaPredicted RBP eCLIP30.23■■■□□ 2.435e-7■■■□□ 17.4
TNK2-201ENST00000333602 FTOQ9C0B1 505 aaKnown RBP eCLIP29.98■■■□□ 2.394e-6■■■□□ 17.4
TNK2-201ENST00000333602 GRSF1Q12849 480 aaKnown RBP eCLIP26.79■■□□□ 1.883e-7■■■□□ 17.1
TNK2-201ENST00000333602 METAP2P50579 478 aaKnown RBP eCLIP31.74■■■□□ 2.675e-7■■■□□ 16.2
TNK2-201ENST00000333602 PPIGQ13427 754 aaKnown RBP eCLIP26.9■■□□□ 1.96e-7■■■□□ 15.6
TNK2-201ENST00000333602 EIF3HO15372 352 aaKnown RBP eCLIP29.04■■■□□ 2.243e-8■■■□□ 14.6
TNK2-201ENST00000333602 SFPQP23246 707 aaKnown RBP eCLIP32.21■■■□□ 2.759e-8■■□□□ 13.5
TNK2-201ENST00000333602 PRPF4O43172 522 aaKnown RBP eCLIP28.72■■■□□ 2.191e-6■■□□□ 13.5
TNK2-201ENST00000333602 ZC3H11AO75152 810 aaKnown RBP eCLIP28.65■■■□□ 2.189e-6■■□□□ 13.5
TNK2-201ENST00000333602 EIF4G2P78344 907 aaKnown RBP eCLIP36.71■■■■□ 3.473e-11■■□□□ 12.5
TNK2-201ENST00000333602 NKRFO15226 690 aaKnown RBP eCLIP28.2■■■□□ 2.16e-7■□□□□ 11.3
TNK2-201ENST00000333602 TIA1P31483 386 aaKnown RBP eCLIP26.52■■□□□ 1.841e-9■□□□□ 8.8
TNK2-201ENST00000333602 HNRNPUQ00839 825 aaKnown RBP eCLIP37.42■■■■□ 3.581e-6■□□□□ 8.8
Retrieved 46 of 46 RNA–protein pairs in 10.7 ms