RNA–Protein interactions for RNA: ENST00000233331.11

INO80B-201, Transcript of INO80 complex subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene INO80B, Length 1,261 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80B-201ENST00000233331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP46.94■■■■■ 5.11e-8■□□□□ 11.2
INO80B-201ENST00000233331 PUM1Q14671 1186 aaKnown RBP eCLIP31.49■■■□□ 2.635e-8■□□□□ 9.4
INO80B-201ENST00000233331 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP28.72■■■□□ 2.195e-8■■■■□ 25.5
INO80B-201ENST00000233331 RBFOX2O43251 390 aaKnown RBP eCLIP23.7■■□□□ 1.388e-8■■□□□ 12
INO80B-201ENST00000233331 BUD13Q9BRD0 619 aaKnown RBP eCLIP34.98■■■■□ 3.199e-8■□□□□ 9.3
INO80B-201ENST00000233331 AQRO60306 1485 aaKnown RBP eCLIP53.97■■■■■ 6.231e-7■■■■□ 20.1
INO80B-201ENST00000233331 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP31.45■■■□□ 2.632e-7■■■■□ 22.5
INO80B-201ENST00000233331 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP26.03■■□□□ 1.762e-7■■■■■ 37.6
INO80B-201ENST00000233331 PPIGQ13427 754 aaKnown RBP eCLIP35.05■■■■□ 3.21e-6■■■■□ 25.7
INO80B-201ENST00000233331 ZNF622Q969S3 477 aaKnown RBP eCLIP39.73■■■■□ 3.951e-6■■■□□ 16.4
INO80B-201ENST00000233331 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP49.47■■■■■ 5.512e-6■■□□□ 11.5
INO80B-201ENST00000233331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP41.55■■■■■ 4.243e-6■■■□□ 15.8
INO80B-201ENST00000233331 SRSF1Q07955 248 aaKnown RBP eCLIP28.58■■■□□ 2.176e-6■■■■□ 21.2
Retrieved 13 of 13 RNA–protein pairs in 4.3 ms