RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 INPP4BO15327 924 aa20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 HSPA8P11142 646 aaKnown RBP20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 PORP16435 677 aaPredicted RBP20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 EPB42P16452 691 aa20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 PSMC3P17980 439 aa20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 XPAP23025 273 aaPredicted RBP20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 NAA20P61599 178 aa20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 NRF1Q16656 503 aa20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 PSRC1Q6PGN9 363 aaPredicted RBP20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 BRAT1Q6PJG6 821 aa20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 CYP20A1Q6UW02 462 aa20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 KIAA2013Q8IYS2 634 aa20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 TMEM102Q8N9M5 508 aaPredicted RBP20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 ULK4Q96C45 1275 aa20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 P2RY13Q9BPV8 354 aa20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 HOPXQ9BPY8 73 aaPredicted RBP20.78■□□□□ 0.92
SPTBN4-203ENST00000392023 C16orf96A6NNT2 1141 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 WASH3PC4AMC7 463 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 PRRT4C9JH25 899 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 KPNA3O00505 521 aaPredicted RBP20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 TIPRLO75663 272 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 ANXA5P08758 320 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 EPORP19235 508 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 VIPR1P32241 457 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 RARS2Q5T160 578 aaKnown RBP20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 MINDY1Q8N5J2 469 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 CLHC1Q8NHS4 586 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 SMG7Q92540 1137 aaKnown RBP20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 ELMO1Q92556 727 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 ABHD8Q96I13 439 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 GID8Q9NWU2 228 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 AURKCQ9UQB9 309 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 CROCCQ5TZA2 2017 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 IGLV3-16A0A075B6K0 115 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 ULK1O75385 1050 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 ADH5P11766 374 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 ITPKAP23677 461 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 PTPN5P54829 565 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 MED21Q13503 144 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 TLR1Q15399 786 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 ADRM1Q16186 407 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 FNDC8Q8TC99 324 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 HERVK_113Q902F9 699 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 PPWD1Q96BP3 646 aaKnown RBP20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 MRPL40Q9NQ50 206 aaKnown RBP20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 CCL27Q9Y4X3 112 aa20.77■□□□□ 0.92
SPTBN4-203ENST00000392023 UPK3BL1B0FP48 263 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 UPK3BL2E5RIL1 263 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 TPST1O60507 370 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 TULP3O75386 442 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 CISD3P0C7P0 127 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 GK3PQ14409 553 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 RBM44Q6ZP01 1051 aaKnown RBP20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 KIAA0907Q7Z7F0 614 aaPredicted RBP20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 RALGPS2Q86X27 583 aaPredicted RBP20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 RNF175Q8N4F7 328 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 PIP4K2CQ8TBX8 421 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 PPM1MQ96MI6 270 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 C19orf43Q9BQ61 176 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 PFDN4Q9NQP4 134 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 ABCD2Q9UBJ2 740 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 PCDHA9Q9Y5H5 950 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 BOLA2-SMG1P6H3BVE0 249 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 AP1G1O43747 822 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 SGTAO43765 313 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 C8BP07358 591 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 TRAP1Q12931 704 aaKnown RBP20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 ABRQ12979 859 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 DMC1Q14565 340 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 PDCD4Q53EL6 469 aaKnown RBP20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 MFSD4BQ5TF39 518 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 RGL4Q8IZJ4 473 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 TMEM125Q96AQ2 219 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 ACTR8Q9H981 624 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 SLC22A14Q9Y267 594 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 ZFC3H1O60293 1989 aaKnown RBP20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 ALPK3Q96L96 1907 aa20.76■□□□□ 0.91
SPTBN4-203ENST00000392023 TCRBV3S1A0A5B6 114 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 SEC22BO75396 215 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 HNRNPA1P09651 372 aaKnown RBP eCLIP20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 CYP2A6P11509 494 aaPredicted RBP20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 CTSCP53634 463 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 EMX2Q04743 252 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 PRKG2Q13237 762 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 ACOX1Q15067 660 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 PTCHD3Q3KNS1 767 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 NANOGP8Q6NSW7 305 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 ASB11Q8WXH4 323 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 NANOGQ9H9S0 305 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 V9GYQ6 96 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 FAM149AA5PLN7 773 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 WDR47O94967 919 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 MSH3P20585 1137 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 PBLDP30039 288 aaPredicted RBP20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 PREPP48147 710 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 ZNF805Q5CZA5 627 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 MTX3Q5HYI7 312 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 C6orf52Q5T4I8 152 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 KLHL35Q6PF15 583 aa20.75■□□□□ 0.91
SPTBN4-203ENST00000392023 SLC22A15Q8IZD6 547 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms