RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 SLC14A2Q15849 920 aa18.97■□□□□ 0.63
DDX54-208ENST00000551344 C6orf132Q5T0Z8 1188 aa18.97■□□□□ 0.63
DDX54-208ENST00000551344 GKN2Q86XP6 184 aa18.97■□□□□ 0.63
DDX54-208ENST00000551344 NRSN1Q8IZ57 195 aa18.97■□□□□ 0.63
DDX54-208ENST00000551344 PELI3Q8N2H9 469 aa18.97■□□□□ 0.63
DDX54-208ENST00000551344 PDCD7Q8N8D1 485 aaKnown RBP18.97■□□□□ 0.63
DDX54-208ENST00000551344 SPC24Q8NBT2 197 aa18.97■□□□□ 0.63
DDX54-208ENST00000551344 LPCAT1Q8NF37 534 aa18.97■□□□□ 0.63
DDX54-208ENST00000551344 TEKT5Q96M29 485 aa18.97■□□□□ 0.63
DDX54-208ENST00000551344 RBM15Q96T37 977 aaKnown RBP eCLIP18.97■□□□□ 0.63
DDX54-208ENST00000551344 MLPHQ9BV36 600 aaPredicted RBP18.97■□□□□ 0.63
DDX54-208ENST00000551344 DOLKQ9UPQ8 538 aa18.97■□□□□ 0.63
DDX54-208ENST00000551344 EME2A4GXA9 379 aaPredicted RBP18.96■□□□□ 0.63
DDX54-208ENST00000551344 CAPNS1P04632 268 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 PYGLP06737 847 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 PECAM1P16284 738 aaPredicted RBP18.96■□□□□ 0.63
DDX54-208ENST00000551344 PTPN3P26045 913 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 CTNNA2P26232 953 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 STC1P52823 247 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 INSM1Q01101 510 aaPredicted RBP18.96■□□□□ 0.63
DDX54-208ENST00000551344 KIF5AQ12840 1032 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 NR0B2Q15466 257 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 QPCTQ16769 361 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 HES3Q5TGS1 186 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 BBS12Q6ZW61 710 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 ZNF765Q7L2R6 523 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 OR1E3Q8WZA6 343 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 TADA1Q96BN2 335 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 SMIM14Q96QK8 99 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 VAT1Q99536 393 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 CEP41Q9BYV8 373 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 ABCG8Q9H221 673 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 GLOD4Q9HC38 313 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 FGF22Q9HCT0 170 aa18.96■□□□□ 0.63
DDX54-208ENST00000551344 A0A0U1RQS6 177 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 TRABD2BA6NFA1 517 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 HACD1B0YJ81 288 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 CLDN7O95471 211 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 MYF5P13349 255 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 CETN2P41208 172 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 GPR1P46091 355 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 RWDD2BP57060 319 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 CDK3Q00526 305 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 XRCC4Q13426 336 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 CDKN3Q16667 212 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 RAET1GQ6H3X3 334 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 B4GALNT4Q76KP1 1039 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 HEATR4Q86WZ0 1026 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 MARCH9Q86YJ5 346 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 LRRC57Q8N9N7 239 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 ZCCHC14Q8WYQ9 949 aaKnown RBP18.95■□□□□ 0.62
DDX54-208ENST00000551344 AP2M1Q96CW1 435 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 PDXPQ96GD0 296 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 ZMIZ1Q9ULJ6 1067 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 CLCA2Q9UQC9 943 aa18.95■□□□□ 0.62
DDX54-208ENST00000551344 AKAP13Q12802 2813 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 CPED1A4D0V7 1026 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 RGSL1A5PLK6 1076 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 GOLGA6CA6NDK9 693 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 GOLGA6BA6NDN3 693 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 APOC4-APOC2K7ER74 178 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 OPA1O60313 960 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 APOC2P02655 101 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 CELA2BP08218 269 aaPredicted RBP18.94■□□□□ 0.62
DDX54-208ENST00000551344 GOLGA6DP0CG33 693 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 CDK18Q07002 472 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 WASHC5Q12768 1159 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 TARDBPQ13148 414 aaKnown RBP eCLIP18.94■□□□□ 0.62
DDX54-208ENST00000551344 ADAMTSL4Q6UY14 1074 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 RFLNAQ6ZTI6 216 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 NYAP1Q6ZVC0 841 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 ZC3H18Q86VM9 953 aaKnown RBP18.94■□□□□ 0.62
DDX54-208ENST00000551344 SYCE1Q8N0S2 351 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 IFI44Q8TCB0 444 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 CCHCR1Q8TD31 782 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 NAT6Q93015 286 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 TRIB3Q96RU7 358 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 HEMGNQ9BXL5 484 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 ABCG4Q9H172 646 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 CCDC86Q9H6F5 360 aaKnown RBP18.94■□□□□ 0.62
DDX54-208ENST00000551344 CYP4F12Q9HCS2 524 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 MRPL40Q9NQ50 206 aaKnown RBP18.94■□□□□ 0.62
DDX54-208ENST00000551344 GOLGA6AQ9NYA3 693 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 DKK4Q9UBT3 224 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 FRYQ5TBA9 3013 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 IGF2RP11717 2491 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 CACNA1BQ00975 2339 aa18.94■□□□□ 0.62
DDX54-208ENST00000551344 C1orf232A0A0U1RR37 186 aa18.93■□□□□ 0.62
DDX54-208ENST00000551344 PRSS38A1L453 326 aa18.93■□□□□ 0.62
DDX54-208ENST00000551344 GRID2IPA4D2P6 1211 aa18.93■□□□□ 0.62
DDX54-208ENST00000551344 MT-CO3P00414 261 aa18.93■□□□□ 0.62
DDX54-208ENST00000551344 CEACAM5P06731 702 aa18.93■□□□□ 0.62
DDX54-208ENST00000551344 PTPN7P35236 360 aa18.93■□□□□ 0.62
DDX54-208ENST00000551344 GSDMDP57764 484 aa18.93■□□□□ 0.62
DDX54-208ENST00000551344 CCDC181Q5TID7 509 aa18.93■□□□□ 0.62
DDX54-208ENST00000551344 KCTD16Q68DU8 428 aa18.93■□□□□ 0.62
DDX54-208ENST00000551344 CCDC70Q6NSX1 233 aa18.93■□□□□ 0.62
DDX54-208ENST00000551344 EFL1Q7Z2Z2 1120 aaKnown RBP18.93■□□□□ 0.62
DDX54-208ENST00000551344 SLC35F3Q8IY50 421 aa18.93■□□□□ 0.62
DDX54-208ENST00000551344 ARL10Q8N8L6 244 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms