RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 FZD2Q14332 565 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 RHOT1Q8IXI2 618 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 SLC25A45Q8N413 288 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 TP53I13Q8NBR0 393 aaPredicted RBP19.12■□□□□ 0.65
DDX54-208ENST00000551344 CNDP2Q96KP4 475 aaKnown RBP19.12■□□□□ 0.65
DDX54-208ENST00000551344 MAK16Q9BXY0 300 aaKnown RBP19.12■□□□□ 0.65
DDX54-208ENST00000551344 NOD2Q9HC29 1040 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 HAUS2Q9NVX0 235 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 AMACRQ9UHK6 382 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 MSRB2Q9Y3D2 182 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 PCDHGC4Q9Y5F7 938 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 PCDHA13Q9Y5I0 950 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 TP53BP1Q12888 1972 aaPredicted RBP19.12■□□□□ 0.65
DDX54-208ENST00000551344 LRRD1A4D1F6 860 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 NEMP2A6NFY4 417 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 ENC1O14682 589 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 LZTS3O60299 673 aaPredicted RBP19.11■□□□□ 0.65
DDX54-208ENST00000551344 PIAS2O75928 621 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 CSF2P04141 144 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 C1SP09871 688 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 CDK4P11802 303 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 C6P13671 934 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 NFKBIAP25963 317 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 NOP2P46087 812 aaKnown RBP19.11■□□□□ 0.65
DDX54-208ENST00000551344 LIG3P49916 1009 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 PDE1CQ14123 709 aaPredicted RBP19.11■□□□□ 0.65
DDX54-208ENST00000551344 LRRC14Q15048 493 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 PARGQ86W56 976 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 TMTC1Q8IUR5 882 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 MAML1Q92585 1016 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 MBNL1Q9NR56 388 aaKnown RBP19.11■□□□□ 0.65
DDX54-208ENST00000551344 DNAJC28Q9NX36 388 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 DDX56Q9NY93 547 aaKnown RBP19.11■□□□□ 0.65
DDX54-208ENST00000551344 PCDHGA1Q9Y5H4 931 aa19.11■□□□□ 0.65
DDX54-208ENST00000551344 EPN1Q9Y6I3 576 aaPredicted RBP19.11■□□□□ 0.65
DDX54-208ENST00000551344 ARID1BQ8NFD5 2236 aaPredicted RBP19.1■□□□□ 0.65
DDX54-208ENST00000551344 TTC24A2A3L6 582 aaPredicted RBP19.1■□□□□ 0.65
DDX54-208ENST00000551344 C3orf70A6NLC5 250 aaPredicted RBP19.1■□□□□ 0.65
DDX54-208ENST00000551344 SDC3O75056 442 aa19.1■□□□□ 0.65
DDX54-208ENST00000551344 NME1P15531 152 aaKnown RBP19.1■□□□□ 0.65
DDX54-208ENST00000551344 IGFALSP35858 605 aa19.1■□□□□ 0.65
DDX54-208ENST00000551344 PEX5P50542 639 aa19.1■□□□□ 0.65
DDX54-208ENST00000551344 THOP1P52888 689 aa19.1■□□□□ 0.65
DDX54-208ENST00000551344 MAXP61244 160 aa19.1■□□□□ 0.65
DDX54-208ENST00000551344 GBE1Q04446 702 aa19.1■□□□□ 0.65
DDX54-208ENST00000551344 SLC10A2Q12908 348 aaPredicted RBP19.1■□□□□ 0.65
DDX54-208ENST00000551344 ZNF211Q13398 564 aaPredicted RBP19.1■□□□□ 0.65
DDX54-208ENST00000551344 ODF2Q5BJF6 829 aa19.1■□□□□ 0.65
DDX54-208ENST00000551344 LIPIQ6XZB0 460 aa19.1■□□□□ 0.65
DDX54-208ENST00000551344 POLR1EQ9GZS1 481 aaKnown RBP19.1■□□□□ 0.65
DDX54-208ENST00000551344 NT5MQ9NPB1 228 aa19.1■□□□□ 0.65
DDX54-208ENST00000551344 DTLQ9NZJ0 730 aa19.1■□□□□ 0.65
DDX54-208ENST00000551344 KLK13Q9UKR3 277 aa19.1■□□□□ 0.65
DDX54-208ENST00000551344 PHTF1Q9UMS5 762 aa19.1■□□□□ 0.65
DDX54-208ENST00000551344 CHD8Q9HCK8 2581 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 A0A0A6YYK5 440 aaPredicted RBP19.09■□□□□ 0.65
DDX54-208ENST00000551344 GOLGA8CPA6NN73 597 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 H3BM21 787 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 SPOPO43791 374 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 PRKCGP05129 697 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 CCNB1P14635 433 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 ZFXP17010 805 aaPredicted RBP19.09■□□□□ 0.65
DDX54-208ENST00000551344 COMTP21964 271 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 FECHP22830 423 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 ITKQ08881 620 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 RALGDSQ12967 914 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 WSCD2Q2TBF2 565 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 HS1BP3Q53T59 392 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 SLC9A4Q6AI14 798 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 ALG1LQ6GMV1 187 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 DPPA4Q7L190 304 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.09■□□□□ 0.65
DDX54-208ENST00000551344 PDCD6IPQ8WUM4 868 aaKnown RBP19.09■□□□□ 0.65
DDX54-208ENST00000551344 HDAC11Q96DB2 347 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 ZNF830Q96NB3 372 aaPredicted RBP19.09■□□□□ 0.65
DDX54-208ENST00000551344 RBM22Q9NW64 420 aaKnown RBP eCLIP19.09■□□□□ 0.65
DDX54-208ENST00000551344 COQ6Q9Y2Z9 468 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 ALG6Q9Y672 507 aa19.09■□□□□ 0.65
DDX54-208ENST00000551344 COL5A1P20908 1838 aaPredicted RBP19.09■□□□□ 0.65
DDX54-208ENST00000551344 SCAMP1O15126 338 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 MAP3K6O95382 1288 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 ELFN1P0C7U0 828 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 CKMT2P17540 419 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 SEMG2Q02383 582 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 IRF4Q15306 451 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 ZNF542PQ5EBM4 170 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 ARMC12Q5T9G4 340 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 TMPRSS7Q7RTY8 843 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 CCDC13Q8IYE1 715 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 PLD5Q8N7P1 536 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 CCNYQ8ND76 341 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 OR4C6Q8NH72 309 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 BTN2A2Q8WVV5 523 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 CALR3Q96L12 384 aaKnown RBP19.08■□□□□ 0.64
DDX54-208ENST00000551344 SEMA3CQ99985 751 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 DUSP23Q9BVJ7 150 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 UCKL1Q9NWZ5 548 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 KCTD5Q9NXV2 234 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 PPIL1Q9Y3C6 166 aa19.08■□□□□ 0.64
DDX54-208ENST00000551344 CSNK1G3Q9Y6M4 447 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms