RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 BNIP2Q12982 314 aa17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 Q4G0T1 1027 aa17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 TERB1Q8NA31 727 aa17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 ACOT9Q9Y305 439 aa17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 EME2A4GXA9 379 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 CES1P23141 567 aa17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 CBX3Q13185 183 aa17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 PTPAQ15257 358 aa17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 CYP2A13Q16696 494 aa17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 APTXQ7Z2E3 356 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 KMOO15229 486 aa17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 NRLP54845 237 aa17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 ZCCHC7Q8N3Z6 543 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 ZNF226Q9NYT6 803 aa17.1■□□□□ 0.33
CACNA1A-253ENST00000637927 SERPINF2P08697 491 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 ELK3P41970 407 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 SLC7A2P52569 658 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 RGS1Q08116 209 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 NAE1Q13564 534 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 SEMA5AQ13591 1074 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 ZNF276Q8N554 614 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 C12orf50Q8NA57 414 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 DNAAF1Q8NEP3 725 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 REPS2Q8NFH8 660 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 GTF3C4Q9UKN8 822 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 NOS2P35228 1153 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 ERVK-9P63128 1117 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 KRR1Q13601 381 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 MED22Q15528 200 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 IRGCQ6NXR0 463 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 BHLHE22Q8NFJ8 381 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 BRD9Q9H8M2 597 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 ERVK-11Q9UQG0 969 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 GPR89AB7ZAQ6 455 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 GPR89BP0CG08 455 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 IRAK1P51617 712 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 SLC45A4Q5BKX6 768 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 LIN54Q6MZP7 749 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 SMARCD3Q6STE5 483 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 PSMA8Q8TAA3 256 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 PYDC1Q8WXC3 89 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 RORBQ92753 470 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 ADAM7Q9H2U9 754 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 GIT1Q9Y2X7 761 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 RNF17Q9BXT8 1623 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 ENPP3O14638 875 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 FASP25445 335 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 RNF144AP50876 292 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 SLC12A3P55017 1021 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 COLEC12Q5KU26 742 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 DENND6BQ8NEG7 585 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 CCDC126Q96EE4 140 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 NUAK2Q9H093 628 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 FBXO44Q9H4M3 255 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 LDAHQ9H6V9 325 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 CLPTM1O96005 669 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 F9P00740 461 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 ATP5BP06576 529 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 ACADLP28330 430 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 RYKP34925 604 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 IFNGR2P38484 337 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 CD151P48509 253 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 ITSN1Q15811 1721 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 OTOP2Q7RTS6 562 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 OFCC1Q8IZS5 231 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 AP4S1Q9Y587 144 aa17.09■□□□□ 0.33
CACNA1A-253ENST00000637927 ARHGEF33A8MVX0 844 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 HSDL1Q3SXM5 330 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 WSCD1Q658N2 575 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 SV2AQ7L0J3 742 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 OR14C36Q8NHC7 312 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 C1QTNF1Q9BXJ1 281 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 OAS3Q9Y6K5 1087 aaKnown RBP17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 ANKRD63C9JTQ0 380 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 E2F3O00716 465 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 RGS14O43566 566 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 CYP3A4P08684 503 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 DLG4P78352 724 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 OC90Q02509 493 aaPredicted RBP17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 SEMA3AQ14563 771 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 WHRNQ9P202 907 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 IKZF3Q9UKT9 509 aa17.08■□□□□ 0.33
CACNA1A-253ENST00000637927 E5RJQ4 531 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 IL18R1Q13478 541 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 IKBKEQ14164 716 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 SGCBQ16585 318 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 ARNTL2Q8WYA1 636 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 ZNF214Q9UL59 606 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 TMEM5Q9Y2B1 443 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 ZSCAN5CA6NGD5 496 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 DPEP2Q9H4A9 486 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 C17orf75Q9HAS0 396 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 KHNYNO15037 678 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 TRAPPC6AO75865 159 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 CXCL14O95715 111 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 CCDC166P0CW27 439 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 ZNF7P17097 686 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 ZNF155Q12901 538 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 SWI5Q1ZZU3 235 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 XRRA1Q6P2D8 792 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms