RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.16■□□□□ 0.66
DDX54-208ENST00000551344 POM121BA6NF01 834 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 TMEM110-MUSTN1A8MSY1 372 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 RIOK3O14730 519 aaKnown RBP19.16■□□□□ 0.66
DDX54-208ENST00000551344 MUSKO15146 869 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 RAD51BO15315 384 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 MMP20O60882 483 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 ITIH2P19823 946 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 GJC1P36383 396 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 ZNF75DP51815 510 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 ZNF235Q14590 738 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 RALGPS1Q5JS13 557 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 LRRC73Q5JTD7 316 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 ZFYVE27Q5T4F4 411 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 MARC1Q5VT66 337 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 ERAP2Q6P179 960 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 SLCO6A1Q86UG4 719 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 CCDC170Q8IYT3 715 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 ADAMTS14Q8WXS8 1223 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 FAF2Q96CS3 445 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 ECHDC3Q96DC8 303 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 CNTNAP3BQ96NU0 1288 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 ANP32EQ9BTT0 268 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 SCNM1Q9BWG6 230 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 CNTNAP3Q9BZ76 1288 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 PCDH12Q9NPG4 1184 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 GPR27Q9NS67 375 aa19.16■□□□□ 0.66
DDX54-208ENST00000551344 ACACBO00763 2458 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 A0A1W2PQ67 120 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 CFAP69A5D8W1 941 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 TRAFD1O14545 582 aaPredicted RBP19.15■□□□□ 0.66
DDX54-208ENST00000551344 LCA5LO95447 670 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 CR2P20023 1033 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 KDELR1P24390 212 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 SLC1A1P43005 524 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 MAGEA1P43355 309 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 LRRC38Q5VT99 294 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 NCBP2-AS2Q69YL0 99 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 KANSL1Q7Z3B3 1105 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 PTAR1Q7Z6K3 402 aaPredicted RBP19.15■□□□□ 0.66
DDX54-208ENST00000551344 RAB44Q7Z6P3 723 aaPredicted RBP19.15■□□□□ 0.66
DDX54-208ENST00000551344 VSIG1Q86XK7 387 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 SPOCK2Q92563 424 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 NUDCD1Q96RS6 583 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 MGME1Q9BQP7 344 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 FTSJ1Q9UET6 329 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 ATP8A1Q9Y2Q0 1164 aa19.15■□□□□ 0.66
DDX54-208ENST00000551344 FAM221BA6H8Z2 402 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 ZNF487B1APH4 448 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 TOR1BO14657 336 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 HYAL3O43820 417 aaPredicted RBP19.14■□□□□ 0.65
DDX54-208ENST00000551344 DKK1O94907 266 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 TOP3BO95985 862 aaKnown RBP19.14■□□□□ 0.65
DDX54-208ENST00000551344 ATXN1LP0C7T5 689 aaKnown RBP19.14■□□□□ 0.65
DDX54-208ENST00000551344 GARSP41250 739 aaKnown RBP19.14■□□□□ 0.65
DDX54-208ENST00000551344 MMP13P45452 471 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 PFN3P60673 137 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 GALNT2Q10471 571 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 SLC22A18ASQ8N1D0 253 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 CHCHD4Q8N4Q1 142 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 TEX26Q8N6G2 289 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 RAPGEF5Q92565 580 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 FATE1Q969F0 183 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 TSGA13Q96PP4 275 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 RNF157Q96PX1 679 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 PANX2Q96RD6 677 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 WRAP53Q9BUR4 548 aaKnown RBP19.14■□□□□ 0.65
DDX54-208ENST00000551344 TOR4AQ9NXH8 423 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 NEUROG3Q9Y4Z2 214 aa19.14■□□□□ 0.65
DDX54-208ENST00000551344 SPTY2D1-AS1A0A0U1RR47 76 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 MFSD11O43934 449 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 SOCS5O75159 536 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 LDOC1O95751 146 aaPredicted RBP19.13■□□□□ 0.65
DDX54-208ENST00000551344 MX2P20592 715 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 CCNCP24863 283 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 HADHBP55084 474 aaKnown RBP19.13■□□□□ 0.65
DDX54-208ENST00000551344 YPEL5P62699 121 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 AGERQ15109 404 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 SPA17Q15506 151 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 IFI16Q16666 785 aaKnown RBP19.13■□□□□ 0.65
DDX54-208ENST00000551344 TIGD7Q6NT04 549 aaPredicted RBP19.13■□□□□ 0.65
DDX54-208ENST00000551344 ZSWIM9Q86XI8 627 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 GAS2L3Q86XJ1 694 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 PGBD5Q8N414 524 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 EID2Q8N6I1 236 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 PQLC3Q8N755 202 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 PAF1Q8N7H5 531 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 PNPLA1Q8N8W4 532 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 NSMCE3Q96MG7 304 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 LUC7LQ9NQ29 371 aaKnown RBP19.13■□□□□ 0.65
DDX54-208ENST00000551344 SCUBE2Q9NQ36 999 aa19.13■□□□□ 0.65
DDX54-208ENST00000551344 MATN3O15232 486 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 HTRA2O43464 458 aaPredicted RBP19.12■□□□□ 0.65
DDX54-208ENST00000551344 SPINK2P20155 84 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 CES1P23141 567 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 DGKAP23743 735 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 CYLC1P35663 651 aaPredicted RBP19.12■□□□□ 0.65
DDX54-208ENST00000551344 MMP12P39900 470 aa19.12■□□□□ 0.65
DDX54-208ENST00000551344 HNRNPKP61978 463 aaKnown RBP eCLIP19.12■□□□□ 0.65
DDX54-208ENST00000551344 PTK2BQ14289 1009 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms