RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 DOCK9Q9BZ29 2069 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 UPK3BL1B0FP48 263 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 UPK3BL2E5RIL1 263 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 NEMP1O14524 444 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 ARHGAP33O14559 1287 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 PPP1R12AO14974 1030 aaPredicted RBP18.2■□□□□ 0.5
CPSF4-205ENST00000440514 AREL1O15033 823 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 DDX3YO15523 660 aaKnown RBP18.2■□□□□ 0.5
CPSF4-205ENST00000440514 NEBLO76041 1014 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 XPAP23025 273 aaPredicted RBP18.2■□□□□ 0.5
CPSF4-205ENST00000440514 AFF3P51826 1226 aaKnown RBP18.2■□□□□ 0.5
CPSF4-205ENST00000440514 ARHGAP8P85298 464 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 DSC2Q02487 901 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 ITKQ08881 620 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 TRAF2Q12933 501 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 ZNF211Q13398 564 aaPredicted RBP18.2■□□□□ 0.5
CPSF4-205ENST00000440514 ZNF284Q2VY69 593 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 KIAA1161Q6NSJ0 714 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 NEK5Q6P3R8 708 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 BBS12Q6ZW61 710 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 PRPF39Q86UA1 669 aaKnown RBP18.2■□□□□ 0.5
CPSF4-205ENST00000440514 PAF1Q8N7H5 531 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 NETO1Q8TDF5 533 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 ECHDC3Q96DC8 303 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 SEMA3CQ99985 751 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 POLR1EQ9GZS1 481 aaKnown RBP18.2■□□□□ 0.5
CPSF4-205ENST00000440514 SEPT10Q9P0V9 454 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 CDV3Q9UKY7 258 aaKnown RBP18.2■□□□□ 0.5
CPSF4-205ENST00000440514 TPX2Q9ULW0 747 aaKnown RBP18.2■□□□□ 0.5
CPSF4-205ENST00000440514 PCDHGC4Q9Y5F7 938 aa18.2■□□□□ 0.5
CPSF4-205ENST00000440514 CEP250Q9BV73 2442 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.19■□□□□ 0.5
CPSF4-205ENST00000440514 MIF4GDA9UHW6 222 aaKnown RBP18.19■□□□□ 0.5
CPSF4-205ENST00000440514 TRAFD1O14545 582 aaPredicted RBP18.19■□□□□ 0.5
CPSF4-205ENST00000440514 SLC31A1O15431 190 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 TSPAN6O43657 245 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 JCHAINP01591 159 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 WNT1P04628 370 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 PYGMP11217 842 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 GRIA4P48058 902 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 COPS2P61201 443 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 RACK1P63244 317 aaKnown RBP18.19■□□□□ 0.5
CPSF4-205ENST00000440514 IFI35P80217 286 aaPredicted RBP18.19■□□□□ 0.5
CPSF4-205ENST00000440514 SEMG2Q02383 582 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 FGL2Q14314 439 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 CACNA1EQ15878 2313 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 UGP2Q16851 508 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 STPG1Q5TH74 334 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 BRAT1Q6PJG6 821 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 UBL4BQ8N7F7 174 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 PDCD6IPQ8WUM4 868 aaKnown RBP18.19■□□□□ 0.5
CPSF4-205ENST00000440514 P3H4Q92791 437 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 RMDN1Q96DB5 314 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 WRAP53Q9BUR4 548 aaKnown RBP18.19■□□□□ 0.5
CPSF4-205ENST00000440514 OSBPL8Q9BZF1 889 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 KCNF1Q9H3M0 494 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 PCDH12Q9NPG4 1184 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 TMEM9BQ9NQ34 198 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 PPP2R2CQ9Y2T4 447 aa18.19■□□□□ 0.5
CPSF4-205ENST00000440514 TMEM131Q92545 1883 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 CFAP54Q96N23 3096 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 C4orf47A7E2U8 309 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 CDX4O14627 284 aaPredicted RBP18.18■□□□□ 0.5
CPSF4-205ENST00000440514 SOCS5O75159 536 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 CPP00450 1065 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 PTMAP06454 111 aaKnown RBP18.18■□□□□ 0.5
CPSF4-205ENST00000440514 PTPN7P35236 360 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 NR2C2P49116 596 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 RPS21P63220 83 aaKnown RBP18.18■□□□□ 0.5
CPSF4-205ENST00000440514 IHHQ14623 411 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 PRKD1Q15139 912 aaPredicted RBP18.18■□□□□ 0.5
CPSF4-205ENST00000440514 TEAD4Q15561 434 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 ALG1LQ6GMV1 187 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 ADAT2Q7Z6V5 191 aaKnown RBP18.18■□□□□ 0.5
CPSF4-205ENST00000440514 ZC3H18Q86VM9 953 aaKnown RBP18.18■□□□□ 0.5
CPSF4-205ENST00000440514 MINDY1Q8N5J2 469 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 CNTD1Q8N815 330 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 HCAR2Q8TDS4 363 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 HES6Q96HZ4 224 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 FEM1CQ96JP0 617 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 PDLIM2Q96JY6 352 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 IL12RB2Q99665 862 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 DMTF1Q9Y222 760 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 ATP8A1Q9Y2Q0 1164 aa18.18■□□□□ 0.5
CPSF4-205ENST00000440514 TRPM6Q9BX84 2022 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 A0A1W2PR77 199 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 IGLON5A6NGN9 336 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 APOC4-APOC2K7ER74 178 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 HTRA2O43464 458 aaPredicted RBP18.17■□□□□ 0.5
CPSF4-205ENST00000440514 MMP20O60882 483 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 APOC2P02655 101 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 SYPP08247 313 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 CD38P28907 300 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 NUDT1P36639 197 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 MMP12P39900 470 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 LIMK1P53667 647 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 ATXN3P54252 364 aaPredicted RBP18.17■□□□□ 0.5
CPSF4-205ENST00000440514 NIPAL4Q0D2K0 466 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 ELP6Q0PNE2 266 aa18.17■□□□□ 0.5
CPSF4-205ENST00000440514 GSE1Q14687 1217 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms