RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 ARHGAP25P42331 645 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 ARSEP51690 589 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 PDK2Q15119 407 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 INAVAQ3KP66 663 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 SRLQ86TD4 932 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 DCP2Q8IU60 420 aaKnown RBP19.21■□□□□ 0.67
DDX54-208ENST00000551344 MAP7D3Q8IWC1 876 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 TP53INP2Q8IXH6 220 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 RHOT2Q8IXI1 618 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 KCTD6Q8NC69 237 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 BAHD1Q8TBE0 780 aaPredicted RBP19.21■□□□□ 0.67
DDX54-208ENST00000551344 PSKH2Q96QS6 385 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 SPTLC3Q9NUV7 552 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 SEPT3Q9UH03 358 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 INTUQ9ULD6 942 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 CA5BQ9Y2D0 317 aa19.21■□□□□ 0.67
DDX54-208ENST00000551344 IGLON5A6NGN9 336 aa19.2■□□□□ 0.66
DDX54-208ENST00000551344 THEGLP0DJG4 465 aa19.2■□□□□ 0.66
DDX54-208ENST00000551344 FOXC1Q12948 553 aa19.2■□□□□ 0.66
DDX54-208ENST00000551344 FGL2Q14314 439 aa19.2■□□□□ 0.66
DDX54-208ENST00000551344 LBRQ14739 615 aaKnown RBP19.2■□□□□ 0.66
DDX54-208ENST00000551344 SHBQ15464 509 aa19.2■□□□□ 0.66
DDX54-208ENST00000551344 ATP13A4Q4VNC1 1196 aa19.2■□□□□ 0.66
DDX54-208ENST00000551344 BRAT1Q6PJG6 821 aa19.2■□□□□ 0.66
DDX54-208ENST00000551344 ABI3BPQ7Z7G0 1075 aa19.2■□□□□ 0.66
DDX54-208ENST00000551344 SAP25Q8TEE9 199 aa19.2■□□□□ 0.66
DDX54-208ENST00000551344 WASF3Q9UPY6 502 aa19.2■□□□□ 0.66
DDX54-208ENST00000551344 TPRP12270 2363 aaKnown RBP19.2■□□□□ 0.66
DDX54-208ENST00000551344 TSPAN11A1L157 253 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 SPINT1O43278 529 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 BUB1BO60566 1050 aaPredicted RBP19.19■□□□□ 0.66
DDX54-208ENST00000551344 MAFKO60675 156 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 MTA2O94776 668 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 PIGNO95427 931 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 ITGAVP06756 1048 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 XPAP23025 273 aaPredicted RBP19.19■□□□□ 0.66
DDX54-208ENST00000551344 HSPA9P38646 679 aaKnown RBP19.19■□□□□ 0.66
DDX54-208ENST00000551344 TAS2R40P59535 323 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 IL9RQ01113 521 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 ELP6Q0PNE2 266 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 DPYSL3Q14195 570 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 TCEAL1Q15170 157 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 UGP2Q16851 508 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 TC2NQ8N9U0 490 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 NSMCE1Q8WV22 266 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 BMFQ96LC9 184 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 MYOCQ99972 504 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 ZNF670Q9BS34 389 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 CALN1Q9BXU9 219 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 RBSNQ9H1K0 784 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 ATP13A3Q9H7F0 1226 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 FZD3Q9NPG1 666 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 KLHL11Q9NVR0 708 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 APOBEC2Q9Y235 224 aaKnown RBP19.19■□□□□ 0.66
DDX54-208ENST00000551344 BTBD3Q9Y2F9 522 aa19.19■□□□□ 0.66
DDX54-208ENST00000551344 TMEM131Q92545 1883 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 A6NNZ2 444 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 PEX11BO96011 259 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 CD48P09326 243 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 EPHA8P29322 1005 aaPredicted RBP19.18■□□□□ 0.66
DDX54-208ENST00000551344 SERPINA4P29622 427 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 RGRP47804 291 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 SCNN1BP51168 640 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 CLDN2P57739 230 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 AP1S1P61966 158 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 SLC10A7Q0GE19 358 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 MMRN1Q13201 1228 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 MESDQ14696 234 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 TMEM52BQ4KMG9 183 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 ANKRD20A8PQ5CZ79 823 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 CFAP58Q5T655 872 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 GCNT7Q6ZNI0 430 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 Q6ZSR6 202 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 GATAD2AQ86YP4 633 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 CPNE8Q86YQ8 564 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 CAMK1DQ8IU85 385 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 BBS5Q8N3I7 341 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 ATPAF2Q8N5M1 289 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 DENND6BQ8NEG7 585 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 CXorf40AQ8TE69 158 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 RFFLQ8WZ73 363 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 IFT43Q96FT9 208 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 MRFAP1L1Q96HT8 127 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 KLF6Q99612 283 aaPredicted RBP19.18■□□□□ 0.66
DDX54-208ENST00000551344 GGT7Q9UJ14 662 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 ITM2BQ9Y287 266 aa19.18■□□□□ 0.66
DDX54-208ENST00000551344 FPGTO14772 594 aa19.17■□□□□ 0.66
DDX54-208ENST00000551344 TNFSF14O43557 240 aa19.17■□□□□ 0.66
DDX54-208ENST00000551344 TM7SF2O76062 418 aa19.17■□□□□ 0.66
DDX54-208ENST00000551344 FTH1P19P0C7X4 201 aa19.17■□□□□ 0.66
DDX54-208ENST00000551344 RABIFP47224 123 aa19.17■□□□□ 0.66
DDX54-208ENST00000551344 POLR2LP62875 67 aaKnown RBP19.17■□□□□ 0.66
DDX54-208ENST00000551344 BCL2L1Q07817 233 aa19.17■□□□□ 0.66
DDX54-208ENST00000551344 BNIP3Q12983 259 aa19.17■□□□□ 0.66
DDX54-208ENST00000551344 PAFAH1B3Q15102 231 aaKnown RBP19.17■□□□□ 0.66
DDX54-208ENST00000551344 KYAT3Q6YP21 454 aaKnown RBP19.17■□□□□ 0.66
DDX54-208ENST00000551344 OR13H1Q8NG92 308 aa19.17■□□□□ 0.66
DDX54-208ENST00000551344 PCDH19Q8TAB3 1148 aa19.17■□□□□ 0.66
DDX54-208ENST00000551344 CENPTQ96BT3 561 aa19.17■□□□□ 0.66
DDX54-208ENST00000551344 C1QTNF7Q9BXJ2 289 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms