RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 NUSAP1Q9BXS6 441 aaKnown RBP18.24■□□□□ 0.51
CPSF4-205ENST00000440514 TSGA10Q9BZW7 698 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 TM9SF3Q9HD45 589 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 NT5MQ9NPB1 228 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 SAE1Q9UBE0 346 aaPredicted RBP18.24■□□□□ 0.51
CPSF4-205ENST00000440514 GUCA1BQ9UMX6 200 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 SLC6A14Q9UN76 642 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 FADS3Q9Y5Q0 445 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 A0A1W2PPC4 97 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 A0A1W2PQU0 124 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 TSPAN11A1L157 253 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 CCDC66A2RUB6 948 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 MATN3O15232 486 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 LATO43561 262 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 FOXD2O60548 495 aaPredicted RBP18.23■□□□□ 0.51
CPSF4-205ENST00000440514 PCDH8O95206 1070 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 CCDC175P0C221 793 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 ENGP17813 658 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 CR2P20023 1033 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 CCNCP24863 283 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 SERPINA4P29622 427 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 HSPA9P38646 679 aaKnown RBP18.23■□□□□ 0.51
CPSF4-205ENST00000440514 AP1S1P61966 158 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 NSUN2Q08J23 767 aaKnown RBP eCLIP18.23■□□□□ 0.51
CPSF4-205ENST00000440514 TFDP2Q14188 446 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 FAM182AQ5T1J6 154 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 SEL1L3Q68CR1 1132 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 B4GALNT4Q76KP1 1039 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 PEX26Q7Z412 305 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 ZSWIM9Q86XI8 627 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 CCDC13Q8IYE1 715 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 KLK6Q92876 244 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 HAUS1Q96CS2 278 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 OLFM3Q96PB7 478 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 HERPUD2Q9BSE4 406 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 ATP13A3Q9H7F0 1226 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 ZFR2Q9UPR6 939 aaKnown RBP18.23■□□□□ 0.51
CPSF4-205ENST00000440514 PI4KAP42356 2102 aa18.23■□□□□ 0.51
CPSF4-205ENST00000440514 TP53BP1Q12888 1972 aaPredicted RBP18.22■□□□□ 0.51
CPSF4-205ENST00000440514 WDR87Q6ZQQ6 2873 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 KCNK1O00180 336 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 WNT9AO14904 365 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 AP1G1O43747 822 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 KRT86O43790 486 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 PRLRP16471 622 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 ITIH2P19823 946 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 MAPK8P45983 427 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 PEX5P50542 639 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 BCL2L1Q07817 233 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 PPIDQ08752 370 aaKnown RBP18.22■□□□□ 0.51
CPSF4-205ENST00000440514 HNRNPDQ14103 355 aaKnown RBP18.22■□□□□ 0.51
CPSF4-205ENST00000440514 GRM3Q14832 879 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 PPP2R5EQ16537 467 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 CFAP58Q5T655 872 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 AADACL2Q6P093 401 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 HORMAD1Q86X24 394 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 SYCE1Q8N0S2 351 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.22■□□□□ 0.51
CPSF4-205ENST00000440514 TEX26Q8N6G2 289 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 OR2I1PQ8NGU4 316 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 NUDCD1Q96RS6 583 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 MYOCQ99972 504 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 GTPBP2Q9BX10 602 aaKnown RBP18.22■□□□□ 0.51
CPSF4-205ENST00000440514 HEMGNQ9BXL5 484 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 SUV39H2Q9H5I1 410 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 SCUBE2Q9NQ36 999 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 LZTFL1Q9NQ48 299 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 DKK3Q9UBP4 350 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 AMFRQ9UKV5 643 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 TTLL3Q9Y4R7 772 aa18.22■□□□□ 0.51
CPSF4-205ENST00000440514 A0A1B0GVT2 93 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 PRR5-ARHGAP8B1AHC4 643 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 PRKCGP05129 697 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 HLA-DQB2P05538 268 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 CCNB1P14635 433 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 TIMP2P16035 220 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 TGM2P21980 687 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 CSNK1EP49674 416 aaKnown RBP18.21■□□□□ 0.51
CPSF4-205ENST00000440514 RWDD2BP57060 319 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 BNC1Q01954 994 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 AP1B1Q10567 949 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 GRIK2Q13002 908 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 ZBTB17Q13105 803 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 PDK1Q15118 436 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 RSPO4Q2I0M5 234 aaPredicted RBP18.21■□□□□ 0.51
CPSF4-205ENST00000440514 TMEM259Q4ZIN3 620 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 SETMARQ53H47 684 aaPredicted RBP18.21■□□□□ 0.51
CPSF4-205ENST00000440514 NAPEPLDQ6IQ20 393 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 TTC7BQ86TV6 843 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 RNF10Q8N5U6 811 aaKnown RBP18.21■□□□□ 0.51
CPSF4-205ENST00000440514 FATE1Q969F0 183 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 RAB7BQ96AH8 199 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 SERAC1Q96JX3 654 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 ZNF641Q96N77 438 aaPredicted RBP18.21■□□□□ 0.51
CPSF4-205ENST00000440514 CEP41Q9BYV8 373 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 NOD2Q9HC29 1040 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 FZD3Q9NPG1 666 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 AASDHPPTQ9NRN7 309 aa18.21■□□□□ 0.51
CPSF4-205ENST00000440514 RBM22Q9NW64 420 aaKnown RBP eCLIP18.21■□□□□ 0.515e-6■■■□□ 15.1
CPSF4-205ENST00000440514 CA5BQ9Y2D0 317 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms