RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.03■□□□□ 0.64
CSPG5-202ENST00000383738 PLEKHG4BQ96PX9 1271 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 SEMA3CQ99985 751 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 A0A0U1RQF3 1178 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 F8W810 466 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 KPNA3O00505 521 aaPredicted RBP19.03■□□□□ 0.64
CSPG5-202ENST00000383738 PIGNO95427 931 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 T-ENOLP0DO92 83 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 CDKN2BP42772 138 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 PITX1P78337 314 aaPredicted RBP19.03■□□□□ 0.64
CSPG5-202ENST00000383738 DDX39BQ13838 428 aaKnown RBP19.03■□□□□ 0.64
CSPG5-202ENST00000383738 RBBP7Q16576 425 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 PLEKHG4Q58EX7 1191 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 FAM47BQ8NA70 645 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 NPAS2Q99743 824 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 SGIP1Q9BQI5 828 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 CAB39LQ9H9S4 337 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 TMCO1Q9UM00 188 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 TLL2Q9Y6L7 1015 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 A0A096LPK6 155 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 LRIG2O94898 1065 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 UGP2Q16851 508 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 MTX3Q5HYI7 312 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 TBCELQ5QJ74 424 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 TRMT10BQ6PF06 316 aaKnown RBP19.03■□□□□ 0.64
CSPG5-202ENST00000383738 TAC4Q86UU9 113 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 SPATA22Q8NHS9 363 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 CDH22Q9UJ99 828 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 SLC45A1Q9Y2W3 748 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 NHSQ6T4R5 1651 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 CCL16O15467 120 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 MGEA5O60502 916 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 TMEM63AO94886 807 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 KRT75O95678 551 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 HOXA11P31270 313 aaPredicted RBP19.03■□□□□ 0.64
CSPG5-202ENST00000383738 LPIN1Q14693 890 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 IMPG1Q17R60 797 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 RAB6CQ53S08 254 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.03■□□□□ 0.64
CSPG5-202ENST00000383738 SLC4A5Q9BY07 1137 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 RAB6CQ9H0N0 254 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 CD274Q9NZQ7 290 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 FAM50BQ9Y247 325 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 ORC6Q9Y5N6 252 aa19.03■□□□□ 0.64
CSPG5-202ENST00000383738 ANKRD36CQ5JPF3 1778 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 MOXD2PA6NHM9 499 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 CLOCKO15516 846 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 SRP72O76094 671 aaKnown RBP19.02■□□□□ 0.64
CSPG5-202ENST00000383738 RALGDSQ12967 914 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 UNC5BQ8IZJ1 945 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 RIN3Q8TB24 985 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 NRG4Q8WWG1 115 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 XYLT2Q9H1B5 865 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 NOL6Q9H6R4 1146 aaKnown RBP19.02■□□□□ 0.64
CSPG5-202ENST00000383738 TRNAU1APQ9NX07 287 aaKnown RBP19.02■□□□□ 0.64
CSPG5-202ENST00000383738 MRPS23Q9Y3D9 190 aaKnown RBP19.02■□□□□ 0.64
CSPG5-202ENST00000383738 FAM149AA5PLN7 773 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 C2CD4BA6NLJ0 364 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 NFKBIAP25963 317 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 CLEC20AQ6ZU45 233 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 ADCK2Q7Z695 626 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 LINC00523Q86TU6 105 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 MON1AQ86VX9 555 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 ZFRQ96KR1 1074 aaKnown RBP19.02■□□□□ 0.64
CSPG5-202ENST00000383738 POLR1BQ9H9Y6 1135 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 ZNF358Q9NW07 568 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 POMPQ9Y244 141 aa19.02■□□□□ 0.64
CSPG5-202ENST00000383738 HBS1LQ9Y450 684 aaKnown RBP19.02■□□□□ 0.64
CSPG5-202ENST00000383738 C9JVG2 144 aa19.02■□□□□ 0.63
CSPG5-202ENST00000383738 INPP4BO15327 924 aa19.02■□□□□ 0.63
CSPG5-202ENST00000383738 SIN3BO75182 1162 aa19.02■□□□□ 0.63
CSPG5-202ENST00000383738 SERPINA6P08185 405 aa19.02■□□□□ 0.63
CSPG5-202ENST00000383738 ITFG2Q969R8 447 aa19.02■□□□□ 0.63
CSPG5-202ENST00000383738 LENG8Q96PV6 779 aaPredicted RBP19.02■□□□□ 0.63
CSPG5-202ENST00000383738 KCTD15Q96SI1 283 aaPredicted RBP19.02■□□□□ 0.63
CSPG5-202ENST00000383738 RSL24D1Q9UHA3 163 aaKnown RBP19.02■□□□□ 0.63
CSPG5-202ENST00000383738 TTC24A2A3L6 582 aaPredicted RBP19.01■□□□□ 0.63
CSPG5-202ENST00000383738 NR5A2O00482 541 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 SOCS7O14512 581 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 SORBS2O94875 1100 aaKnown RBP19.01■□□□□ 0.63
CSPG5-202ENST00000383738 GNAZP19086 355 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 NUP107P57740 925 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 ACTR3P61158 418 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 LRRC38Q5VT99 294 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 OLFML1Q6UWY5 402 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 AGMOQ6ZNB7 445 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 CYP2S1Q96SQ9 504 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 EGFL7Q9UHF1 273 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 DCDC2Q9UHG0 476 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 C2orf81A6NN90 581 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 TBL1XO60907 577 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 DAB1O75553 588 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 GRIA3P42263 894 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 CTBP1Q13363 440 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 CERCAMQ5T4B2 595 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 TEDDM1Q5T9Z0 273 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 RNASEH2BQ5TBB1 312 aaKnown RBP19.01■□□□□ 0.63
CSPG5-202ENST00000383738 PGAP2Q9UHJ9 254 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 A0A0A0MRY4 1105 aa19.01■□□□□ 0.63
CSPG5-202ENST00000383738 ALBP02768 609 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms