RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ARHGEF7Q14155 803 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 CMC1Q7Z7K0 106 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 ADAM28Q9UKQ2 775 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 FOXD2O60548 495 aaPredicted RBP19.09■□□□□ 0.65
CSPG5-202ENST00000383738 ITGA2BP08514 1039 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 GJA1P17302 382 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 LDLRAP1Q5SW96 308 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 EMC10Q5UCC4 262 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 HFE2Q6ZVN8 426 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 NANOGNBQ7Z5D8 188 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 FIBCD1Q8N539 461 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.09■□□□□ 0.65
CSPG5-202ENST00000383738 EMID1Q96A84 441 aaPredicted RBP19.09■□□□□ 0.65
CSPG5-202ENST00000383738 OLA1Q9NTK5 396 aaKnown RBP19.09■□□□□ 0.65
CSPG5-202ENST00000383738 SELENONQ9NZV5 590 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 UGT1A9O60656 530 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 NFKB1P19838 968 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 SERPINB9P50453 376 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 SOX4Q06945 474 aaPredicted RBP19.08■□□□□ 0.65
CSPG5-202ENST00000383738 GALNTL6Q49A17 601 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 SPATA6LQ8N4H0 392 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 TOP6BLQ8N6T0 577 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 FAM210AQ96ND0 272 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 SEPHS2Q99611 448 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 UGT1A7Q9HAW7 530 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 UGT1A10Q9HAW8 530 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 UGT1A8Q9HAW9 530 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 PKD2L2Q9NZM6 624 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 BAG5Q9UL15 447 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 CRYL1Q9Y2S2 319 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 MTSS1O43312 755 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 ADRA1BP35368 520 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 POU5F1Q01860 360 aaKnown RBP19.08■□□□□ 0.65
CSPG5-202ENST00000383738 FUT10Q6P4F1 479 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 SZRD1Q7Z422 152 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 ZNF467Q7Z7K2 595 aaPredicted RBP19.08■□□□□ 0.65
CSPG5-202ENST00000383738 ZNF280BQ86YH2 543 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 TMEM199Q8N511 208 aa19.08■□□□□ 0.65
CSPG5-202ENST00000383738 ADGRA2Q96PE1 1338 aa19.08■□□□□ 0.64
CSPG5-202ENST00000383738 GABRR2P28476 465 aa19.08■□□□□ 0.64
CSPG5-202ENST00000383738 PPARGP37231 505 aaPredicted RBP19.08■□□□□ 0.64
CSPG5-202ENST00000383738 PPM1LQ5SGD2 360 aa19.08■□□□□ 0.64
CSPG5-202ENST00000383738 SEL1L3Q68CR1 1132 aa19.08■□□□□ 0.64
CSPG5-202ENST00000383738 JADE3Q92613 823 aa19.08■□□□□ 0.64
CSPG5-202ENST00000383738 GID8Q9NWU2 228 aa19.08■□□□□ 0.64
CSPG5-202ENST00000383738 GLRA3O75311 464 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 SPAG6O75602 509 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 ZNF23P17027 643 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 TRPC1P48995 793 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 NAGLUP54802 743 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 C21orf59P57076 290 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 ARHGAP15Q53QZ3 475 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 NECAB2Q7Z6G3 386 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 C7orf61Q8IZ16 206 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 DACT3Q96B18 629 aaPredicted RBP19.07■□□□□ 0.64
CSPG5-202ENST00000383738 SMCHD1A6NHR9 2005 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 RHOBTB1O94844 696 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 FDFT1P37268 417 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 BBS12Q6ZW61 710 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 LMO3Q8TAP4 145 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 MID2Q9UJV3 735 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 NAV1Q8NEY1 1877 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 TPP1O14773 563 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 PHGDHO43175 533 aaKnown RBP19.07■□□□□ 0.64
CSPG5-202ENST00000383738 PAGE1O75459 146 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 ZNF865P0CJ78 1059 aaPredicted RBP19.07■□□□□ 0.64
CSPG5-202ENST00000383738 HECTD3Q5T447 861 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 GPR107Q5VW38 600 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 C17orf99Q6UX52 265 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 BNIPLQ7Z465 357 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 RCN3Q96D15 328 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 DCUN1D1Q96GG9 259 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 BORCS6Q96GS4 357 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 TBC1D13Q9NVG8 400 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 DNAJB4Q9UDY4 337 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 CRLS1Q9UJA2 301 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 GNEQ9Y223 722 aaKnown RBP19.07■□□□□ 0.64
CSPG5-202ENST00000383738 TCRBV7S3A2A0A539 114 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 ABLIM1O14639 778 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 TRIM16O95361 564 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 IL1R2P27930 398 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 CBX3Q13185 183 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 PPM1JQ5JR12 505 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 C6orf10Q5SRN2 563 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 LRRC40Q9H9A6 602 aa19.07■□□□□ 0.64
CSPG5-202ENST00000383738 DNAJC25-GNG10A0A024R161 153 aa19.06■□□□□ 0.64
CSPG5-202ENST00000383738 SMIM31A0A1B0GVY4 71 aa19.06■□□□□ 0.64
CSPG5-202ENST00000383738 ANGPT2O15123 496 aa19.06■□□□□ 0.64
CSPG5-202ENST00000383738 RNASEH1O60930 286 aaKnown RBP19.06■□□□□ 0.64
CSPG5-202ENST00000383738 CKBP12277 381 aa19.06■□□□□ 0.64
CSPG5-202ENST00000383738 GPR15P49685 360 aa19.06■□□□□ 0.64
CSPG5-202ENST00000383738 LSM3P62310 102 aaKnown RBP19.06■□□□□ 0.64
CSPG5-202ENST00000383738 SCARA3Q6AZY7 606 aa19.06■□□□□ 0.64
CSPG5-202ENST00000383738 FBXO27Q8NI29 283 aa19.06■□□□□ 0.64
CSPG5-202ENST00000383738 CPT1BQ92523 772 aa19.06■□□□□ 0.64
CSPG5-202ENST00000383738 PHF21BQ96EK2 531 aa19.06■□□□□ 0.64
CSPG5-202ENST00000383738 SLC17A6Q9P2U8 582 aa19.06■□□□□ 0.64
CSPG5-202ENST00000383738 CCL22O00626 93 aa19.06■□□□□ 0.64
CSPG5-202ENST00000383738 PRPF4O43172 522 aaKnown RBP eCLIP19.06■□□□□ 0.64
CSPG5-202ENST00000383738 CYP1A1P04798 512 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms