RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 THAP1Q9NVV9 213 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 TOP3BO95985 862 aaKnown RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 RPLP2P05387 115 aaKnown RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 PLK1P53350 603 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 STRA8Q7Z7C7 330 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 ULK4Q96C45 1275 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 SLC7A6OSQ96CW6 309 aaPredicted RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 NR1H4Q96RI1 486 aaPredicted RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 ILKAPQ9H0C8 392 aaPredicted RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 KCNK4Q9NYG8 393 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 MAP3K13O43283 966 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 OCM2P0CE71 109 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 OCMP0CE72 109 aaPredicted RBP19.11■□□□□ 0.65
CSPG5-202ENST00000383738 ERVK-10P10266 1014 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 UQCRBP14927 111 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 EPHA3P29320 983 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 ATP5C1P36542 298 aaKnown RBP19.11■□□□□ 0.65
CSPG5-202ENST00000383738 CDCA2Q69YH5 1023 aaPredicted RBP19.11■□□□□ 0.65
CSPG5-202ENST00000383738 CIR1Q86X95 450 aaPredicted RBP19.11■□□□□ 0.65
CSPG5-202ENST00000383738 UTP4Q969X6 686 aaKnown RBP19.11■□□□□ 0.65
CSPG5-202ENST00000383738 CCDC167Q9P0B6 97 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 ALADP13716 330 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 SMAD3P84022 425 aaKnown RBP19.11■□□□□ 0.65
CSPG5-202ENST00000383738 TRAF2Q12933 501 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 SGO1Q5FBB7 561 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 TMCO5AQ8N6Q1 288 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 CCDC185Q8N715 623 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 KYQ8NBH2 561 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 SLAIN1Q8ND83 568 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 LPCAT1Q8NF37 534 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 DGCR14Q96DF8 476 aaKnown RBP19.11■□□□□ 0.65
CSPG5-202ENST00000383738 SERPINB11Q96P15 392 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 FAM96AQ9H5X1 160 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 TLL1O43897 1013 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 CCNB1P14635 433 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 IL10P22301 178 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 GSTA3Q16772 222 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 TTPALQ9BTX7 342 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 ACSS3Q9H6R3 686 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 PCDH18Q9HCL0 1135 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 GMIPQ9P107 970 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 ALOX15BO15296 676 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 EDN1P05305 212 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 NR4A1P22736 598 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 RPL9P32969 192 aaKnown RBP19.11■□□□□ 0.65
CSPG5-202ENST00000383738 SPRP35270 261 aaPredicted RBP19.11■□□□□ 0.65
CSPG5-202ENST00000383738 CA9Q16790 459 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 SYPL2Q5VXT5 272 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 ALLCQ8N6M5 410 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 VPS50Q96JG6 964 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 SERAC1Q96JX3 654 aa19.11■□□□□ 0.65
CSPG5-202ENST00000383738 GSTA4O15217 222 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 TUFMP49411 452 aaKnown RBP19.1■□□□□ 0.65
CSPG5-202ENST00000383738 SLC5A3P53794 718 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 C1orf220Q5T0J3 134 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 CCDC81Q6ZN84 652 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 MYO1HQ8N1T3 1032 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 SEC14L1Q92503 715 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 NCLNQ969V3 563 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 HSPBAP1Q96EW2 488 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 MIPEPQ99797 713 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 ABCC13Q9NSE7 274 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 LNPEPQ9UIQ6 1025 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 SNX5Q9Y5X3 404 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 ANXA9O76027 345 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 CXCL14O95715 111 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 THRAP10827 490 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 HADHAP40939 763 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 KPNA2P52292 529 aaKnown RBP19.1■□□□□ 0.65
CSPG5-202ENST00000383738 CCDC15Q0P6D6 951 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 PTRHD1Q6GMV3 140 aaKnown RBP19.1■□□□□ 0.65
CSPG5-202ENST00000383738 NAT16Q8N8M0 369 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 TDRD5Q8NAT2 981 aaKnown RBP19.1■□□□□ 0.65
CSPG5-202ENST00000383738 PBXIP1Q96AQ6 731 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 RMND5BQ96G75 393 aaPredicted RBP19.1■□□□□ 0.65
CSPG5-202ENST00000383738 CDYLQ9Y232 598 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 SIPA1L3O60292 1781 aaPredicted RBP19.1■□□□□ 0.65
CSPG5-202ENST00000383738 TM7SF2O76062 418 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 SLC10A3P09131 477 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 VEGFBP49765 207 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 AFF1P51825 1210 aaKnown RBP19.1■□□□□ 0.65
CSPG5-202ENST00000383738 USP41Q3LFD5 358 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 TSPAN14Q8NG11 270 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 S100A14Q9HCY8 104 aa19.1■□□□□ 0.65
CSPG5-202ENST00000383738 MRPS15P82914 257 aaKnown RBP19.09■□□□□ 0.65
CSPG5-202ENST00000383738 AGKQ53H12 422 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 VARS2Q5ST30 1063 aaKnown RBP19.09■□□□□ 0.65
CSPG5-202ENST00000383738 ANGPTL8Q6UXH0 198 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 ZDHHC17Q8IUH5 632 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 SNX31Q8N9S9 440 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 PIWIL1Q96J94 861 aaKnown RBP19.09■□□□□ 0.65
CSPG5-202ENST00000383738 FTHL17Q9BXU8 183 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 NDEL1Q9GZM8 345 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 EPB41L4BQ9H329 900 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 EFCAB1Q9HAE3 211 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.09■□□□□ 0.65
CSPG5-202ENST00000383738 AP3B1O00203 1094 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 UNGP13051 313 aaPredicted RBP19.09■□□□□ 0.65
CSPG5-202ENST00000383738 GPD2P43304 727 aa19.09■□□□□ 0.65
CSPG5-202ENST00000383738 GDF10P55107 478 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms