RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 FAM156AQ8NDB6 213 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 NAT14Q8WUY8 206 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 RNF157Q96PX1 679 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 NDUFA13Q9P0J0 144 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 MYH7P12883 1935 aa19.15■□□□□ 0.66
CSPG5-202ENST00000383738 APOC4-APOC2K7ER74 178 aa19.14■□□□□ 0.66
CSPG5-202ENST00000383738 APOC2P02655 101 aa19.14■□□□□ 0.66
CSPG5-202ENST00000383738 ITGB6P18564 788 aa19.14■□□□□ 0.66
CSPG5-202ENST00000383738 HDCP19113 662 aa19.14■□□□□ 0.66
CSPG5-202ENST00000383738 BHLHE22Q8NFJ8 381 aaPredicted RBP19.14■□□□□ 0.66
CSPG5-202ENST00000383738 ZNF558Q96NG5 402 aa19.14■□□□□ 0.66
CSPG5-202ENST00000383738 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.14■□□□□ 0.66
CSPG5-202ENST00000383738 TMPRSS4Q9NRS4 437 aa19.14■□□□□ 0.66
CSPG5-202ENST00000383738 ADCY6O43306 1168 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 AMHP03971 560 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 CTNNB1P35222 781 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 ASPAP45381 313 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 PTK2BQ14289 1009 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 FNBP1LQ5T0N5 605 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 DCLRE1AQ6PJP8 1040 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 LCLAT1Q6UWP7 414 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 PAAF1Q9BRP4 392 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 SPATA16Q9BXB7 569 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 SLC7A8Q9UHI5 535 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 SIX4Q9UIU6 781 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 COL1A2P08123 1366 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 XIRP1Q702N8 1843 aaKnown RBP19.14■□□□□ 0.65
CSPG5-202ENST00000383738 LINC00854A0A1B0GVQ3 168 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 NCF1BA6NI72 391 aaPredicted RBP19.14■□□□□ 0.65
CSPG5-202ENST00000383738 YJEFN3A6XGL0 299 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 NCF1CA8MVU1 366 aaPredicted RBP19.14■□□□□ 0.65
CSPG5-202ENST00000383738 STX7O15400 261 aaKnown RBP19.14■□□□□ 0.65
CSPG5-202ENST00000383738 PAPSS1O43252 624 aaPredicted RBP19.14■□□□□ 0.65
CSPG5-202ENST00000383738 TLR5O60602 858 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 NCF1P14598 390 aaPredicted RBP19.14■□□□□ 0.65
CSPG5-202ENST00000383738 IGFBP4P22692 258 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 OXCT1P55809 520 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 OR6K2Q8NGY2 324 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 RRN3Q9NYV6 651 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 COQ4Q9Y3A0 265 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 AP4B1Q9Y6B7 739 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 KLHL33A6NCF5 533 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 SDR42E2A6NKP2 422 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 GM2AP17900 193 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 CDK7P50613 346 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 DPYSL3Q14195 570 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 FUT11Q495W5 492 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 FOXR2Q6PJQ5 311 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 MON1BQ7L1V2 547 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 GIPC3Q8TF64 312 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 NRDE2Q9H7Z3 1164 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 ACTL7BQ9Y614 415 aa19.14■□□□□ 0.65
CSPG5-202ENST00000383738 VAPBO95292 243 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 TKTP29401 623 aaKnown RBP19.13■□□□□ 0.65
CSPG5-202ENST00000383738 RPL5P46777 297 aaKnown RBP19.13■□□□□ 0.65
CSPG5-202ENST00000383738 OTUD3Q5T2D3 398 aaPredicted RBP19.13■□□□□ 0.65
CSPG5-202ENST00000383738 PARP8Q8N3A8 854 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 TNFAIP8O95379 198 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 CPA3P15088 417 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 C16orf89Q6UX73 402 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 KBTBD2Q8IY47 623 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 CATSPER1Q8NEC5 780 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 OR52K1Q8NGK4 314 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 PIWIL2Q8TC59 973 aaKnown RBP19.13■□□□□ 0.65
CSPG5-202ENST00000383738 HAPLN2Q9GZV7 340 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 SDCBP2Q9H190 292 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 DYRK4Q9NR20 520 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 ZNF180Q9UJW8 692 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 ADAMTS5Q9UNA0 930 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 CCDC85CA6NKD9 419 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 ATG7O95352 703 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 F7P08709 466 aaPredicted RBP19.13■□□□□ 0.65
CSPG5-202ENST00000383738 PSMD7P51665 324 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 DLG1Q12959 904 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 CARTPTQ16568 116 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 PLPP4Q5VZY2 271 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 FCRL2Q96LA5 508 aaPredicted RBP19.13■□□□□ 0.65
CSPG5-202ENST00000383738 TCF7L2Q9NQB0 619 aa19.13■□□□□ 0.65
CSPG5-202ENST00000383738 MATKP42679 507 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 RHOAP61586 193 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 NAA20P61599 178 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 POLD3Q15054 466 aaPredicted RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 PERM1Q5SV97 790 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 PATL1Q86TB9 770 aaKnown RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 SPATA17Q96L03 361 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 MRPL17Q9NRX2 175 aaKnown RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 DNAAF2Q9NVR5 837 aaKnown RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 hCG_1818297A0A087WSY0 165 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 A0A1W2PQH9 124 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 EDNRBP24530 442 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 ITGADQ13349 1161 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 NET1Q7Z628 596 aaPredicted RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 ZDHHC14Q8IZN3 488 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 CLEC4FQ8N1N0 589 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 PAWRQ96IZ0 340 aaKnown RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 FBXL18Q96ME1 805 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 TMEM109Q9BVC6 243 aa19.12■□□□□ 0.65
CSPG5-202ENST00000383738 MRPL9Q9BYD2 267 aaKnown RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 WDR55Q9H6Y2 383 aaPredicted RBP19.12■□□□□ 0.65
CSPG5-202ENST00000383738 PPCSQ9HAB8 311 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms