RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 NOP9Q86U38 636 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 SVOPQ8N4V2 548 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 ART4Q93070 314 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 HPDLQ96IR7 371 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 ZFYVE19Q96K21 471 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 C9orf16Q9BUW7 83 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 OSBPL11Q9BXB4 747 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 OSBPL6Q9BZF3 934 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 GOLPH3Q9H4A6 298 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 STARD7Q9NQZ5 370 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 UBQLN1Q9UMX0 589 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PIN4Q9Y237 131 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 USP20Q9Y2K6 914 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 LOC100653049A0A140TA62 436 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PRR23AA6NEV1 266 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 TAF4O00268 1085 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 DPYSL4O14531 572 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 DNALI1O14645 258 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PSMD3O43242 534 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 B4GALT4O60513 344 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 EDF1O60869 148 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 HUS1O60921 280 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 KRT34O76011 436 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 C4BPAP04003 597 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 MMP3P08254 477 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 ITGA2BP08514 1039 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 CPA3P15088 417 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PSEN2P49810 448 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 MYL6P60660 151 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 ARHGAP1Q07960 439 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 TOP3AQ13472 1001 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 CDCA2Q69YH5 1023 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 SLC27A1Q6PCB7 646 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 RIPOR1Q6ZS17 1223 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 SLC30A5Q8TAD4 765 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 CPA5Q8WXQ8 436 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 EMID1Q96A84 441 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 ZNF333Q96JL9 665 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PLEKHA5Q9HAU0 1116 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 C8orf4Q9NR00 106 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 SLC38A7Q9NVC3 462 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 DPP3Q9NY33 737 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 ZNF180Q9UJW8 692 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 TTLL3Q9Y4R7 772 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 SNX13Q9Y5W8 968 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 MED26O95402 600 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 TPBGLP0DKB5 382 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 RALAP11233 206 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 IL12RB1P42701 662 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 GALK1P51570 392 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 PURAQ00577 322 aaKnown RBP6.34□□□□□ -1.39
VPS13D-202ENST00000460333 MAMDC4Q6UXC1 1216 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 ZCCHC9Q8N567 271 aaKnown RBP6.34□□□□□ -1.39
VPS13D-202ENST00000460333 OR6B3Q8NGW1 331 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 EXD1Q8NHP7 514 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 HELQQ8TDG4 1101 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 GLMNQ92990 594 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 ATP6V1E2Q96A05 226 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 MTG1Q9BT17 334 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-202ENST00000460333 CISHQ9NSE2 258 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 DNAJC16Q9Y2G8 782 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 LRRC42Q9Y546 428 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 ARIH2O95376 493 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 ASMTLO95671 621 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 ITGB3P05106 788 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 CYP1A2P05177 515 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 PYGLP06737 847 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 CAPN1P07384 714 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 ME2P23368 584 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 ATN1P54259 1190 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-202ENST00000460333 FOLH1Q04609 750 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 ITGADQ13349 1161 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 SEZ6Q53EL9 994 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 ILDR2Q71H61 639 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 EXOC3L1Q86VI1 746 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 MCOLN2Q8IZK6 566 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 RASGEF1CQ8N431 466 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 ADCY4Q8NFM4 1077 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 FEZF2Q8TBJ5 459 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 OSCP1Q8WVF1 389 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 DEPDC7Q96QD5 511 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 KLF6Q99612 283 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-202ENST00000460333 DCUN1D5Q9BTE7 237 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 NT5C1AQ9BXI3 368 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 DCLK3Q9C098 648 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 CDT1Q9H211 546 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 FZD8Q9H461 694 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 RSAD1Q9HA92 442 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 PCDH9Q9HC56 1237 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 SETD4Q9NVD3 440 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 MSRAQ9UJ68 235 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 C15orf38-AP3S2A0A0A6YYH1 394 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 SMIM35A0A1B0GVV1 85 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 HEATR9A2RTY3 570 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 M0QYV0 167 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 IDH3BO43837 385 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 ABL1P00519 1130 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 SHBGP04278 402 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 SERPINE1P05121 402 aa6.34□□□□□ -1.39
VPS13D-202ENST00000460333 CXCL8P10145 99 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms