RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 POLE3Q9NRF9 147 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 BFARQ9NZS9 450 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 MPP6Q9NZW5 540 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 DNAJC25-GNG10A0A024R161 153 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 C1orf232A0A0U1RR37 186 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 PNMA8CA0A1B0GUJ8 204 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 TRIM24O15164 1050 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 STX7O15400 261 aaKnown RBP6.36□□□□□ -1.39
VPS13D-202ENST00000460333 MAGEC1O60732 1142 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 GJB6O95452 261 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ZNF286BP0CG31 522 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 AKR1A1P14550 325 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ADSSP30520 456 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 SPRP35270 261 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-202ENST00000460333 OTUD4Q01804 1114 aaKnown RBP6.36□□□□□ -1.39
VPS13D-202ENST00000460333 BNC1Q01954 994 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 SPIDRQ14159 915 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 TARBP2Q15633 366 aaKnown RBP6.36□□□□□ -1.39
VPS13D-202ENST00000460333 UGP2Q16851 508 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 DUPD1Q68J44 220 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 SLC47A2Q86VL8 602 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 CCNYQ8ND76 341 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 RSPH1Q8WYR4 309 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 FAXDC2Q96IV6 333 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ZBTB45Q96K62 511 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-202ENST00000460333 APOL4Q9BPW4 351 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 SPATA16Q9BXB7 569 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 MTMR12Q9C0I1 747 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 WDR12Q9GZL7 423 aaKnown RBP6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ILKAPQ9H0C8 392 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-202ENST00000460333 IKZF4Q9H2S9 585 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 PDLIM7Q9NR12 457 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 PDGFCQ9NRA1 345 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 PNPLA3Q9NST1 481 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 GIN1Q9NXP7 522 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ITGA11Q9UKX5 1188 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 AGAP1Q9UPQ3 857 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 STYXL1Q9Y6J8 313 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ATAD5Q96QE3 1844 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 A0A0U1RQJ8 604 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 EVPLLA8MZ36 301 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PHGDHO43175 533 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 ACAT1P24752 427 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PNPLA4P41247 253 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PRKAA2P54646 552 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 YWHAHQ04917 246 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 NR1D2Q14995 579 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 CNPY1Q3B7I2 92 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 ARMCX4Q5H9R4 360 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 HEATR6Q6AI08 1181 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 THOC7Q6I9Y2 204 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 TAF2Q6P1X5 1199 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 C4orf50Q6ZRC1 276 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 SLC26A11Q86WA9 606 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 DEFB107AQ8IZN7 70 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 ELMOD1Q8N336 334 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 MINDY2Q8NBR6 621 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 SLC20A1Q8WUM9 679 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 KRT35Q92764 455 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 TSPAN18Q96SJ8 248 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 APBA2Q99767 749 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 AAASQ9NRG9 546 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PLK2Q9NYY3 685 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 RAB26Q9ULW5 256 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PDLIM1O00151 329 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 TSPAN9O75954 239 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 ITGA4P13612 1032 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 BCAR1P56945 870 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 C1QBPQ07021 282 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PTK2BQ14289 1009 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 MFSD10Q14728 455 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 KRT72Q14CN4 511 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 ITPRIPL1Q6GPH6 555 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 TWF2Q6IBS0 349 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 OR6B2Q6IFH4 312 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PRMT9Q6P2P2 845 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 MICU2Q8IYU8 434 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 STX19Q8N4C7 294 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 LNX1Q8TBB1 728 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 TRAPPC12Q8WVT3 735 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 OLFM1Q99784 485 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 EPAS1Q99814 870 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 NFKBIZQ9BYH8 718 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 FAM124BQ9H5Z6 455 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 BCAS3Q9H6U6 928 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 THAP1Q9NVV9 213 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PI4K2BG5E9Z4 385 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 APOL1O14791 398 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PEX10O60683 326 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 TRMUO75648 421 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 VTNP04004 478 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 BGNP21810 368 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 STIP1P31948 543 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 GRB14Q14449 540 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 ZNF394Q53GI3 561 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 SPDYAQ5MJ70 313 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 TDRD10Q5VZ19 366 aaKnown RBP6.35□□□□□ -1.39
VPS13D-202ENST00000460333 C6orf89Q6UWU4 347 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 PACS1Q6VY07 963 aa6.35□□□□□ -1.39
VPS13D-202ENST00000460333 EFL1Q7Z2Z2 1120 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms