RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 LSM1O15116 133 aaKnown RBP6.37□□□□□ -1.39
VPS13D-202ENST00000460333 KRT36O76013 467 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 CSPG5O95196 566 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 LSM8O95777 96 aaKnown RBP6.37□□□□□ -1.39
VPS13D-202ENST00000460333 POLR2EP19388 210 aaKnown RBP6.37□□□□□ -1.39
VPS13D-202ENST00000460333 RPL21P46778 160 aaKnown RBP6.37□□□□□ -1.39
VPS13D-202ENST00000460333 AQP5P55064 265 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 DAB2P98082 770 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 DGUOKQ16854 277 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 SCARA5Q6ZMJ2 495 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 PIGWQ7Z7B1 504 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 CLEC4FQ8N1N0 589 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 TSPAN14Q8NG11 270 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 KIF12Q96FN5 646 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 HEXIM2Q96MH2 286 aaKnown RBP6.37□□□□□ -1.39
VPS13D-202ENST00000460333 PI4K2AQ9BTU6 479 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 PACSIN1Q9BY11 444 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 ASPSCR1Q9BZE9 553 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 THAP2Q9H0W7 228 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 CYP3A43Q9HB55 503 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 CACYBPQ9HB71 228 aaKnown RBP6.37□□□□□ -1.39
VPS13D-202ENST00000460333 TXNRD2Q9NNW7 524 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 SIX2Q9NPC8 291 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 PCMTD2Q9NV79 361 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 KIF17Q9P2E2 1029 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 KIAA1257Q9ULG3 409 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 CARD8Q9Y2G2 431 aa6.37□□□□□ -1.39
VPS13D-202ENST00000460333 CD4P01730 458 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 MYL4P12829 197 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 TSHRP16473 764 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 KCNJ1P48048 391 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ERFP50548 548 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 RUNX1T1Q06455 604 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 FCHO2Q0JRZ9 810 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 PTK6Q13882 451 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ARMC3Q5W041 872 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 GPAT2Q6NUI2 795 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 DLK2Q6UY11 383 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 TLK2Q86UE8 772 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 METTL23Q86XA0 190 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 TTC8Q8TAM2 541 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 URGCPQ8TCY9 931 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 HSPH1Q92598 858 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 COPS5Q92905 334 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 NCLNQ969V3 563 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 LRRC39Q96DD0 335 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 APOPT1Q96IL0 206 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 STMN3Q9NZ72 180 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 CLIC5Q9NZA1 410 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 NINJ2Q9NZG7 142 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 PCYOX1Q9UHG3 505 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 APPL1Q9UKG1 709 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 NRCAMQ92823 1304 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 A0A087WZ62 844 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 C17orf102A2RUQ5 167 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 RCCD1A6NED2 376 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 TRIM49D1C9J1S8 452 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 STAG3L1P0CL83 205 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ALDH1A3P47895 512 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 PRMT2P55345 433 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 BFSP2Q13515 415 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 CLEC16AQ2KHT3 1053 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 WDR72Q3MJ13 1102 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 KCTD21Q4G0X4 260 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ZBTB49Q6ZSB9 765 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 LUZP2Q86TE4 346 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 NT5DC3Q86UY8 548 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 MCUQ8NE86 351 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 FNIP1Q8TF40 1166 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 BRI3BPQ8WY22 251 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 TLCD1Q96CP7 247 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ZNF668Q96K58 619 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-202ENST00000460333 BTBD9Q96Q07 612 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 PAFAH2Q99487 392 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 FDXACB1Q9BRP7 624 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-202ENST00000460333 PHACTR1Q9C0D0 580 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 DNAJB4Q9UDY4 337 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ZNF263O14978 683 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ENTPD5O75356 428 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 CNMDO75829 334 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 SOX6P35712 828 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 VCPP55072 806 aaKnown RBP6.36□□□□□ -1.39
VPS13D-202ENST00000460333 USP46P62068 366 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 IRF5Q13568 498 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ZNF846Q147U1 533 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ZNF792Q3KQV3 632 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 CMPK2Q5EBM0 449 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 ZNF618Q5T7W0 954 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 PDPK2PQ6A1A2 396 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 CCNJLQ8IV13 435 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 NDUFAF2Q8N183 169 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 CCDC33Q8N5R6 958 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 CCNYL1Q8N7R7 359 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 SCAIQ8N9R8 606 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 KYQ8NBH2 561 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 PDPRQ8NCN5 879 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 EPS8L1Q8TE68 723 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 SKA1Q96BD8 255 aa6.36□□□□□ -1.39
VPS13D-202ENST00000460333 MOV10Q9HCE1 1003 aaKnown RBP6.36□□□□□ -1.39
VPS13D-202ENST00000460333 AVENQ9NQS1 362 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms