RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 FAM170AA1A519 330 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 KRT6AP02538 564 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 ALBP02768 609 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 KRT6BP04259 564 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 INSRRP14616 1297 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 ANPEPP15144 967 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 CNTFP26441 200 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 HOXD13P35453 343 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.39□□□□□ -1.39
VPS13D-202ENST00000460333 ATP1A4Q13733 1029 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 PCBP1Q15365 356 aaKnown RBP eCLIP6.39□□□□□ -1.391e-7■■■■■ 26.9
VPS13D-202ENST00000460333 HGSNATQ68CP4 663 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 ZNF410Q86VK4 478 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 ANKMY2Q8IV38 441 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 PCSK9Q8NBP7 692 aaKnown RBP6.39□□□□□ -1.39
VPS13D-202ENST00000460333 TAS1R2Q8TE23 839 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 NAT14Q8WUY8 206 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 SEMA4AQ9H3S1 761 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 RAD21L1Q9H4I0 556 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 GTSE1Q9NYZ3 720 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 SLC12A4Q9UP95 1085 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 KIF13BQ9NQT8 1826 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 ZMYM2Q9UBW7 1377 aa6.39□□□□□ -1.39
VPS13D-202ENST00000460333 AGPSO00116 658 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 AP3B1O00203 1094 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 AIM2O14862 343 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 LGR5O75473 907 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 ADRB2P07550 413 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 CDH3P22223 829 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 BLVRAP53004 296 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 IFI35P80217 286 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 PLOD1Q02809 727 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 SMYD5Q6GMV2 418 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 IYDQ6PHW0 289 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 C3orf62Q6ZUJ4 267 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 ZNF572Q7Z3I7 529 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 DHDDSQ86SQ9 333 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 C18orf8Q96DM3 657 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 ARHGEF26Q96DR7 871 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 EFCAB1Q9HAE3 211 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 DNAAF2Q9NVR5 837 aaKnown RBP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 TEKT2Q9UIF3 430 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 AURKCQ9UQB9 309 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 F8W8V4 182 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 GOLGA8RI6L899 631 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 BIRC5O15392 142 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 CNOT3O75175 753 aaKnown RBP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 GLRA3O75311 464 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 USP1O94782 785 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 PIGRP01833 764 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 CYP11B1P15538 503 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 C4BPBP20851 252 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 GRK2P25098 689 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 JAM2P57087 298 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 RPL26P61254 145 aaKnown RBP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 RBP5P82980 135 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 CAPSQ13938 189 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 STILQ15468 1287 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 MFSD4BQ5TF39 518 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 ACAD10Q6JQN1 1059 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 NT5DC4Q86YG4 428 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 TMEM174Q8WUU8 243 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 OSBPL7Q9BZF2 842 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 TMEM165Q9HC07 324 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 XPNPEP1Q9NQW7 623 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 C20orf96Q9NUD7 363 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 PHIPQ8WWQ0 1821 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 TRPC5OSA6NMA1 111 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 SLCO1B7G3V0H7 640 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 DNM1LO00429 736 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 DDX3XO00571 662 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 WDR47O94967 919 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 ABHD2P08910 425 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 CD58P19256 250 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 ACADVLP49748 655 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 CLCN3P51790 818 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 RAB14P61106 215 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 DLG4P78352 724 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 TMEM132DQ14C87 1099 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 QPCTQ16769 361 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 SLC5A9Q2M3M2 681 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 LMBRD2Q68DH5 695 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 BSNDQ8WZ55 320 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 TMEM109Q9BVC6 243 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 STRA6Q9BX79 667 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 C6orf203Q9P0P8 240 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 MORF4L1Q9UBU8 362 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 TMED5Q9Y3A6 229 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 ZSCAN5CA6NGD5 496 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 TISP43B9A030 160 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 MSCO60682 206 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 CCDC130P13994 396 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 UQCRBP14927 111 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 RAG1P15918 1043 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 JAK1P23458 1154 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 ST13P50502 369 aaKnown RBP6.38□□□□□ -1.39
VPS13D-202ENST00000460333 POU5F1BQ06416 359 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 OVGP1Q12889 678 aa6.38□□□□□ -1.39
VPS13D-202ENST00000460333 LPIN1Q14693 890 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms