RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 BTBD8Q5XKL5 378 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 CLEC20AQ6ZU45 233 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 INTS8Q75QN2 995 aaKnown RBP16.63■□□□□ 0.25
CLK3-211ENST00000563297 GPRIN1Q7Z2K8 1008 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 FRMD1Q8N878 549 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 TAS1R2Q8TE23 839 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 WHAMMQ8TF30 809 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 RLN3Q8WXF3 142 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 NACA2Q9H009 215 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 CYP3A43Q9HB55 503 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 DEC1Q9P2X7 70 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 SCML2Q9UQR0 700 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 MAP1BP46821 2468 aaKnown RBP16.63■□□□□ 0.25
CLK3-211ENST00000563297 TRIM24O15164 1050 aa16.62■□□□□ 0.25
CLK3-211ENST00000563297 TRIM49P0CI25 452 aa16.62■□□□□ 0.25
CLK3-211ENST00000563297 TRIM49CP0CI26 452 aa16.62■□□□□ 0.25
CLK3-211ENST00000563297 ATP5C1P36542 298 aaKnown RBP16.62■□□□□ 0.25
CLK3-211ENST00000563297 MCCD1P59942 119 aaPredicted RBP16.62■□□□□ 0.25
CLK3-211ENST00000563297 KCNV2Q8TDN2 545 aa16.62■□□□□ 0.25
CLK3-211ENST00000563297 CCDC47Q96A33 483 aaKnown RBP16.62■□□□□ 0.25
CLK3-211ENST00000563297 EDEM2Q9BV94 578 aa16.62■□□□□ 0.25
CLK3-211ENST00000563297 NT5C1AQ9BXI3 368 aa16.62■□□□□ 0.25
CLK3-211ENST00000563297 NMUR1Q9HB89 426 aa16.62■□□□□ 0.25
CLK3-211ENST00000563297 CYLDQ9NQC7 956 aa16.62■□□□□ 0.25
CLK3-211ENST00000563297 HCN2Q9UL51 889 aa16.62■□□□□ 0.25
CLK3-211ENST00000563297 LNP1A1A4G5 178 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 C4orf47A7E2U8 309 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 PATE3B3GLJ2 98 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 KHNYNO15037 678 aaKnown RBP16.61■□□□□ 0.25
CLK3-211ENST00000563297 CILPO75339 1184 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 KCNK5O95279 499 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 TRIM21P19474 475 aaKnown RBP16.61■□□□□ 0.25
CLK3-211ENST00000563297 ACO1P21399 889 aaKnown RBP16.61■□□□□ 0.25
CLK3-211ENST00000563297 PSMC2P35998 433 aaKnown RBP16.61■□□□□ 0.25
CLK3-211ENST00000563297 DHPSP49366 369 aaPredicted RBP16.61■□□□□ 0.25
CLK3-211ENST00000563297 ENPEPQ07075 957 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 ADAM9Q13443 819 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 PREPLQ4J6C6 727 aaPredicted RBP16.61■□□□□ 0.25
CLK3-211ENST00000563297 KRBA2Q6ZNG9 492 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 CYP2U1Q7Z449 544 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 FAM186BQ8IYM0 893 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 GUF1Q8N442 669 aaKnown RBP16.61■□□□□ 0.25
CLK3-211ENST00000563297 ZNF513Q8N8E2 541 aaPredicted RBP16.61■□□□□ 0.25
CLK3-211ENST00000563297 TERB1Q8NA31 727 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 JAKMIP2Q96AA8 810 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 IMPG2Q9BZV3 1241 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 MBD1Q9UIS9 605 aaPredicted RBP16.61■□□□□ 0.25
CLK3-211ENST00000563297 NUDT5Q9UKK9 219 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 STARD13Q9Y3M8 1113 aa16.61■□□□□ 0.25
CLK3-211ENST00000563297 ASCC3Q8N3C0 2202 aaKnown RBP16.61■□□□□ 0.25
CLK3-211ENST00000563297 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 A0A1W2PQH9 124 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 TCRBV21S2A2A0A5A6 115 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 CYP26A1O43174 497 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 MAP3K13O43283 966 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 RARGP13631 454 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 KRT13P13646 458 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 CD58P19256 250 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 RPL13P26373 211 aaKnown RBP16.6■□□□□ 0.25
CLK3-211ENST00000563297 PMLP29590 882 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 KIF11P52732 1056 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 IRX4P78413 519 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 MAP7D1Q3KQU3 841 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 C10orf76Q5T2E6 689 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 PPP1R26Q5T8A7 1209 aaPredicted RBP16.6■□□□□ 0.25
CLK3-211ENST00000563297 NUDT18Q6ZVK8 323 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 TMEFF1Q8IYR6 380 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 PGBD3Q8N328 593 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 HMGB4Q8WW32 186 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 PIGKQ92643 395 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 DUSP16Q9BY84 665 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 NIF3L1Q9GZT8 377 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 GOLPH3LQ9H4A5 285 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 MMRN2Q9H8L6 949 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 PNPLA8Q9NP80 782 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLK3-211ENST00000563297 BCCIPQ9P287 314 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLK3-211ENST00000563297 CIZ1Q9ULV3 898 aaPredicted RBP16.6■□□□□ 0.25
CLK3-211ENST00000563297 PCDHA5Q9Y5H7 936 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 PCNX2A6NKB5 2137 aa16.6■□□□□ 0.25
CLK3-211ENST00000563297 CEP192Q8TEP8 1941 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 PLXND1Q9Y4D7 1925 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 KMT2BQ9UMN6 2715 aaPredicted RBP16.59■□□□□ 0.25
CLK3-211ENST00000563297 A0A1W2PQ27 194 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 A0A1W2PQ64 194 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 A0A1W2PQD8 194 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 CDX4O14627 284 aaPredicted RBP16.59■□□□□ 0.25
CLK3-211ENST00000563297 MDM4O15151 490 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 ZNF202O95125 648 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 PLA2G4AP47712 749 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 ZCWPW2Q504Y3 356 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 KLHDC10Q6PID8 442 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 TPGS1Q6ZTW0 290 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 LPCAT2Q7L5N7 544 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 SCD5Q86SK9 330 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 MIB1Q86YT6 1006 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 ZNF276Q8N554 614 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 SPACA7Q96KW9 195 aa16.59■□□□□ 0.25
CLK3-211ENST00000563297 XPO6Q96QU8 1125 aaKnown RBP16.59■□□□□ 0.25
CLK3-211ENST00000563297 BBS2Q9BXC9 721 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms