RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 MYL1P05976 194 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 GBP1P32455 592 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 TIE1P35590 1138 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 GRIA2P42262 883 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 TNFRSF4P43489 277 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 KIR2DL1P43626 348 aaPredicted RBP16.67■□□□□ 0.26
CLK3-211ENST00000563297 TUBP50607 506 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 CREB5Q02930 508 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 GAD2Q05329 585 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 CEP135Q66GS9 1140 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 TCEAL6Q6IPX3 200 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 SPOPLQ6IQ16 392 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 PHTF2Q8N3S3 785 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 ALLCQ8N6M5 410 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 C12orf29Q8N999 325 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 IL17RCQ8NAC3 791 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 TXNDC5Q8NBS9 432 aaKnown RBP16.67■□□□□ 0.26
CLK3-211ENST00000563297 SLC2A14Q8TDB8 520 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 TCEAL3Q969E4 200 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 OTUB2Q96DC9 234 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 CNOT6LQ96LI5 555 aaKnown RBP16.67■□□□□ 0.26
CLK3-211ENST00000563297 ARHGEF4Q9NR80 690 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 KRT82Q9NSB4 513 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 HMGXB4Q9UGU5 601 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 FRMD4BQ9Y2L6 1034 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 SH3BP1Q9Y3L3 701 aa16.67■□□□□ 0.26
CLK3-211ENST00000563297 SGK1O00141 431 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 CALUO43852 315 aaPredicted RBP16.66■□□□□ 0.26
CLK3-211ENST00000563297 KLF8O95600 359 aaPredicted RBP16.66■□□□□ 0.26
CLK3-211ENST00000563297 HLA-DRAP01903 254 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 ASPAP45381 313 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 VAMP7P51809 220 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 MAP3K7CLP57077 242 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 HSF5Q4G112 596 aaPredicted RBP16.66■□□□□ 0.26
CLK3-211ENST00000563297 PMS2CLQ68D20 193 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 BBS7Q8IWZ6 715 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 ETFBKMTQ8IXQ9 262 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 NAT16Q8N8M0 369 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 MDGA1Q8NFP4 955 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 OLIG1Q8TAK6 271 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 SPATA32Q96LK8 384 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 DUSP9Q99956 384 aaKnown RBP16.66■□□□□ 0.26
CLK3-211ENST00000563297 ZDHHC9Q9Y397 364 aa16.66■□□□□ 0.26
CLK3-211ENST00000563297 FAM237AA0A1B0GTK4 181 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.65■□□□□ 0.26
CLK3-211ENST00000563297 MAPK13O15264 365 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 RHOBTB3O94955 611 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 TBX18O95935 607 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 PRR29P0C7W0 189 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 BCKDHBP21953 392 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 SYKP43405 635 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 NDUFA8P51970 172 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 KDSRQ06136 332 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 C11orf74Q86VG3 221 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 TTC30AQ86WT1 665 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 TMEM25Q86YD3 366 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 TWNKQ96RR1 684 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 LSM14BQ9BX40 385 aaKnown RBP16.65■□□□□ 0.26
CLK3-211ENST00000563297 FBXO44Q9H4M3 255 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 ZDHHC4Q9NPG8 344 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.65■□□□□ 0.261e-6■■■■■ 73.2
CLK3-211ENST00000563297 SPHK2Q9NRA0 654 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 FAM49BQ9NUQ9 324 aa16.65■□□□□ 0.26
CLK3-211ENST00000563297 PI4KAP42356 2102 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 TBC1D3BA6NDS4 549 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 HHLA1C9JL84 531 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 HOXC11O43248 304 aaPredicted RBP16.64■□□□□ 0.25
CLK3-211ENST00000563297 GREM1O60565 184 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 TLR5O60602 858 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 ADAM23O75077 832 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 ALDH1A2O94788 518 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 KIF20AO95235 890 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 IRF1P10914 325 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 KCNA4P22459 653 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 ADORA2BP29275 332 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 PIK3CAP42336 1068 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 PPP3CAQ08209 521 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 DPYDQ12882 1025 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 NFIL3Q16649 462 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 EOGTQ5NDL2 527 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 N4BP2L1Q5TBK1 243 aaPredicted RBP16.64■□□□□ 0.25
CLK3-211ENST00000563297 RNF43Q68DV7 783 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 HTR3DQ70Z44 454 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 CYFIP2Q96F07 1278 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 HNRNPABQ99729 332 aaKnown RBP16.64■□□□□ 0.25
CLK3-211ENST00000563297 KLF16Q9BXK1 252 aaPredicted RBP16.64■□□□□ 0.25
CLK3-211ENST00000563297 APOBEC3GQ9HC16 384 aaKnown RBP16.64■□□□□ 0.25
CLK3-211ENST00000563297 POLMQ9NP87 494 aaPredicted RBP16.64■□□□□ 0.25
CLK3-211ENST00000563297 TLR8Q9NR97 1041 aaKnown RBP16.64■□□□□ 0.25
CLK3-211ENST00000563297 OSER1Q9NX31 292 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 MAPK8IP1Q9UQF2 711 aa16.64■□□□□ 0.25
CLK3-211ENST00000563297 CHD8Q9HCK8 2581 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 TULP3O75386 442 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 FAM200BP0CF97 657 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 NR2F2P24468 414 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 P2RY2P41231 377 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 GCLMP48507 274 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 KRT85P78386 507 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 INCA1Q0VD86 236 aa16.63■□□□□ 0.25
CLK3-211ENST00000563297 ANO4Q32M45 955 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms