RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 CCDC192P0DO97 292 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 OPRD1P41143 372 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 CDH8P55286 799 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 PSMD2Q13200 908 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 PKP1Q13835 747 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 DMC1Q14565 340 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 GAB4Q2WGN9 574 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 TDRD10Q5VZ19 366 aaKnown RBP16.76■□□□□ 0.27
CLK3-211ENST00000563297 B3GALNT2Q8NCR0 500 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 PARD3BQ8TEW8 1205 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 SYAP1Q96A49 352 aaPredicted RBP16.76■□□□□ 0.27
CLK3-211ENST00000563297 ZC3H10Q96K80 434 aaKnown RBP16.76■□□□□ 0.27
CLK3-211ENST00000563297 ELOVL4Q9GZR5 314 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 VRTNQ9H8Y1 702 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 DMAC2Q9NW81 257 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 CFAP45Q9UL16 551 aa16.76■□□□□ 0.27
CLK3-211ENST00000563297 MYO18AQ92614 2054 aaKnown RBP16.75■□□□□ 0.27
CLK3-211ENST00000563297 ANTXRLA6NF34 631 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 K7EQS6 105 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 AKAP3O75969 853 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 EPN2O95208 641 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 OAS1P00973 400 aaKnown RBP16.75■□□□□ 0.27
CLK3-211ENST00000563297 C4BPAP04003 597 aaKnown RBP16.75■□□□□ 0.27
CLK3-211ENST00000563297 SLFN14P0C7P3 912 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 ZNF806P0C7X5 589 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 CLDN10P78369 228 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 DNM1Q05193 864 aaKnown RBP16.75■□□□□ 0.27
CLK3-211ENST00000563297 STK4Q13043 487 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 SF3A2Q15428 464 aaKnown RBP16.75■□□□□ 0.27
CLK3-211ENST00000563297 CCDC6Q16204 474 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 CEP57L1Q8IYX8 460 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 NUP93Q8N1F7 819 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 KIAA1958Q8N8K9 716 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 ELMO3Q96BJ8 720 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 CPQQ9Y646 472 aa16.75■□□□□ 0.27
CLK3-211ENST00000563297 LRRIQ3A6PVS8 624 aaPredicted RBP16.74■□□□□ 0.27
CLK3-211ENST00000563297 VNN1O95497 513 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 HSP90AA1P07900 732 aaKnown RBP16.74■□□□□ 0.27
CLK3-211ENST00000563297 YWHAQP27348 245 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 AP3M2P53677 418 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 PLK5Q496M5 336 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 PAQR9Q6ZVX9 377 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 FILIP1Q7Z7B0 1213 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 HSCBQ8IWL3 235 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 KIAA0895Q8NCT3 520 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 GOLGA5Q8TBA6 731 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 USP33Q8TEY7 942 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 TMEM174Q8WUU8 243 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 ACDQ96AP0 544 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 PAGE5Q96GU1 130 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 SLITRK1Q96PX8 696 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 KCNK16Q96T55 309 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 DUSP15Q9H1R2 295 aaPredicted RBP16.74■□□□□ 0.27
CLK3-211ENST00000563297 SMYD3Q9H7B4 428 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 SMPD4Q9NXE4 827 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 EBF1Q9UH73 591 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 CHORDC1Q9UHD1 332 aaPredicted RBP16.74■□□□□ 0.27
CLK3-211ENST00000563297 KIAA1549LQ6ZVL6 1849 aa16.74■□□□□ 0.27
CLK3-211ENST00000563297 ACTN4O43707 911 aaKnown RBP16.73■□□□□ 0.27
CLK3-211ENST00000563297 APBB3O95704 486 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 CYP17A1P05093 508 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 IFRD2Q12894 506 aaPredicted RBP16.73■□□□□ 0.27
CLK3-211ENST00000563297 BIRC3Q13489 604 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 NCOA4Q13772 614 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 DHCR24Q15392 516 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 ZNF699Q32M78 642 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 KMT5BQ4FZB7 885 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 C2orf27AQ580R0 203 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 ZNF667Q5HYK9 610 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 PPM1JQ5JR12 505 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 PLA2G2CQ5R387 149 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 RHBDF2Q6PJF5 856 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 SLC9A9Q8IVB4 645 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 SPRYD3Q8NCJ5 442 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 CCDC26Q8TAB7 109 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 SCAMP5Q8TAC9 235 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 SDCBP2Q9H190 292 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 KCTD10Q9H3F6 313 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 RXFP3Q9NSD7 469 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 IL37Q9NZH6 218 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 CFAP97Q9P2B7 532 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 PCDHGA5Q9Y5G8 931 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 MYH10P35580 1976 aa16.73■□□□□ 0.27
CLK3-211ENST00000563297 SLC9A3R1O14745 358 aaPredicted RBP16.72■□□□□ 0.27
CLK3-211ENST00000563297 TNFRSF10BO14763 440 aa16.72■□□□□ 0.27
CLK3-211ENST00000563297 SCAMP3O14828 347 aaKnown RBP16.72■□□□□ 0.27
CLK3-211ENST00000563297 DCLK1O15075 740 aa16.72■□□□□ 0.27
CLK3-211ENST00000563297 RTN3O95197 1032 aaPredicted RBP16.72■□□□□ 0.27
CLK3-211ENST00000563297 ADRB1P08588 477 aa16.72■□□□□ 0.27
CLK3-211ENST00000563297 MBL2P11226 248 aaPredicted RBP16.72■□□□□ 0.27
CLK3-211ENST00000563297 SLC6A11P48066 632 aa16.72■□□□□ 0.27
CLK3-211ENST00000563297 DLG4P78352 724 aa16.72■□□□□ 0.27
CLK3-211ENST00000563297 AASDHQ4L235 1098 aaPredicted RBP16.72■□□□□ 0.27
CLK3-211ENST00000563297 FAM35AQ86V20 835 aa16.72■□□□□ 0.27
CLK3-211ENST00000563297 C12orf50Q8NA57 414 aaPredicted RBP16.72■□□□□ 0.27
CLK3-211ENST00000563297 CNTNAP3BQ96NU0 1288 aa16.72■□□□□ 0.27
CLK3-211ENST00000563297 CNTNAP3Q9BZ76 1288 aa16.72■□□□□ 0.27
CLK3-211ENST00000563297 ACACBO00763 2458 aa16.72■□□□□ 0.27
CLK3-211ENST00000563297 A0A1B0GVL5 298 aa16.71■□□□□ 0.27
CLK3-211ENST00000563297 PDXKO00764 312 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms