RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 DYNLT1P63172 113 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 DENND2CQ68D51 928 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 KDM7AQ6ZMT4 941 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 TLK2Q86UE8 772 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 TMEM40Q8WWA1 233 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 TUBGCP4Q9UGJ1 667 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 DNPEPQ9ULA0 475 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 MED7O43513 233 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 GRAP2O75791 330 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 CYP3A5P20815 502 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 IL1R2P27930 398 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 FKBP1BP68106 108 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 SKOR1P84550 965 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 RAB6CQ53S08 254 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 BCAS4Q8TDM0 211 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 RAB6CQ9H0N0 254 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 NXF3Q9H4D5 531 aaKnown RBP22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 AAASQ9NRG9 546 aa22.4■■□□□ 1.18
SPTBN4-203ENST00000392023 SLC15A5A6NIM6 579 aa22.39■■□□□ 1.18
SPTBN4-203ENST00000392023 TREHO43280 583 aa22.39■■□□□ 1.18
SPTBN4-203ENST00000392023 ACSL3O95573 720 aa22.39■■□□□ 1.18
SPTBN4-203ENST00000392023 ZNF157P51786 506 aaPredicted RBP22.39■■□□□ 1.18
SPTBN4-203ENST00000392023 TAF5Q15542 800 aa22.39■■□□□ 1.18
SPTBN4-203ENST00000392023 XYLT1Q86Y38 959 aa22.39■■□□□ 1.18
SPTBN4-203ENST00000392023 PIWIL1Q96J94 861 aaKnown RBP22.39■■□□□ 1.18
SPTBN4-203ENST00000392023 GJD2Q9UKL4 321 aa22.39■■□□□ 1.18
SPTBN4-203ENST00000392023 GNEQ9Y223 722 aaKnown RBP22.39■■□□□ 1.18
SPTBN4-203ENST00000392023 SNX9Q9Y5X1 595 aa22.39■■□□□ 1.18
SPTBN4-203ENST00000392023 EIF3HO15372 352 aaKnown RBP eCLIP22.39■■□□□ 1.17
SPTBN4-203ENST00000392023 HOXD8P13378 290 aaPredicted RBP22.39■■□□□ 1.17
SPTBN4-203ENST00000392023 MAN1A1P33908 653 aa22.39■■□□□ 1.17
SPTBN4-203ENST00000392023 RBP5P82980 135 aa22.39■■□□□ 1.17
SPTBN4-203ENST00000392023 TAF1CQ15572 869 aaPredicted RBP22.39■■□□□ 1.17
SPTBN4-203ENST00000392023 SH3PXD2AQ5TCZ1 1133 aa22.39■■□□□ 1.17
SPTBN4-203ENST00000392023 RUNDC3BQ96NL0 473 aa22.39■■□□□ 1.17
SPTBN4-203ENST00000392023 LHX5Q9H2C1 402 aa22.39■■□□□ 1.17
SPTBN4-203ENST00000392023 NMRK2Q9NPI5 230 aa22.39■■□□□ 1.17
SPTBN4-203ENST00000392023 PARP2Q9UGN5 583 aa22.39■■□□□ 1.17
SPTBN4-203ENST00000392023 A6NJR5 290 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 MYL3P08590 195 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 PAEPP09466 180 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 RGS7P49802 495 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 CCNG2Q16589 344 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 PPP1R2P3Q6NXS1 205 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 SPOCD1Q6ZMY3 1216 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 RCOR2Q8IZ40 523 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 EPS8L3Q8TE67 593 aaKnown RBP22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 MAIP1Q8WWC4 291 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 MRPL45Q9BRJ2 306 aaKnown RBP22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 FAM49BQ9NUQ9 324 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 HTTP42858 3142 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 ZSWIM8A7E2V4 1837 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 SIGLEC16A6NMB1 481 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 LRCH4O75427 683 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 GAS8O95995 478 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 CD48P09326 243 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 GPD2P43304 727 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 SEC24CP53992 1094 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 MAP2K5Q13163 448 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 PIGHQ14442 188 aaPredicted RBP22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 ZNF410Q86VK4 478 aa22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 GCOM2Q9BZD3 368 aaPredicted RBP22.38■■□□□ 1.17
SPTBN4-203ENST00000392023 RIPK2O43353 540 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 ATICP31939 592 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 MORN1Q5T089 497 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 ZNF365Q70YC5 407 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 ACOT1Q86TX2 421 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 SESTD1Q86VW0 696 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 SLCO2A1Q92959 643 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 SNF8Q96H20 258 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 TRIM6Q9C030 488 aaPredicted RBP22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 TSPAN16Q9UKR8 245 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 ITGA11Q9UKX5 1188 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 BARX2Q9UMQ3 279 aaPredicted RBP22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 ZNF148Q9UQR1 794 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 ATXN2Q99700 1313 aaKnown RBP22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 ZNF865P0CJ78 1059 aaPredicted RBP22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 ATF2P15336 505 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 GRM5P41594 1212 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 PLCB3Q01970 1234 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 PTK6Q13882 451 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 MFSD10Q14728 455 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 CHADLQ6NUI6 762 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 MDM1Q8TC05 714 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 RNF39Q9H2S5 420 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 CDC42EP4Q9H3Q1 356 aaKnown RBP22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 ANAPC5Q9UJX4 755 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 STRIP2Q9ULQ0 834 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 C2CD2Q9Y426 696 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 NME7Q9Y5B8 376 aa22.37■■□□□ 1.17
SPTBN4-203ENST00000392023 F2P00734 622 aa22.36■■□□□ 1.17
SPTBN4-203ENST00000392023 P4HA1P13674 534 aa22.36■■□□□ 1.17
SPTBN4-203ENST00000392023 IFI35P80217 286 aaPredicted RBP22.36■■□□□ 1.17
SPTBN4-203ENST00000392023 PREPLQ4J6C6 727 aaPredicted RBP22.36■■□□□ 1.17
SPTBN4-203ENST00000392023 B4GALNT4Q76KP1 1039 aa22.36■■□□□ 1.17
SPTBN4-203ENST00000392023 GRK7Q8WTQ7 553 aa22.36■■□□□ 1.17
SPTBN4-203ENST00000392023 RBM41Q96IZ5 413 aaKnown RBP22.36■■□□□ 1.17
SPTBN4-203ENST00000392023 NEU2Q9Y3R4 380 aa22.36■■□□□ 1.17
SPTBN4-203ENST00000392023 CHUKO15111 745 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms