RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 SHROOM1Q2M3G4 852 aaPredicted RBP20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 TMEM63BQ5T3F8 832 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 CYP4F22Q6NT55 531 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 CCNJLQ8IV13 435 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 SLC20A1Q8WUM9 679 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 C1orf54Q8WWF1 131 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 HHIPL1Q96JK4 782 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 CAPNS2Q96L46 248 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 NKIRAS1Q9NYS0 192 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 SCAF8Q9UPN6 1271 aaKnown RBP20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 NUMBLQ9Y6R0 609 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 ATMINO43313 823 aaPredicted RBP20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 SLURP2P0DP57 97 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 MKRN3Q13064 507 aaKnown RBP20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 USP4Q13107 963 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 CALCOCO2Q13137 446 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 SIX1Q15475 284 aaPredicted RBP20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 CMPK2Q5EBM0 449 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 MTMR14Q8NCE2 650 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 SLCO2A1Q92959 643 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 GBA2Q9HCG7 927 aaPredicted RBP20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 PHTF1Q9UMS5 762 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 ATP9AO75110 1047 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 LRRN2O75325 713 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 POLR2MP0CAP2 368 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 ARHGEF18Q6ZSZ5 1173 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 MIGA2Q7L4E1 593 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 ARHGAP22Q7Z5H3 698 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 C2orf69Q8N8R5 385 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 OCEL1Q9H607 264 aa20.01■□□□□ 0.79
HERPUD2-201ENST00000311350 DLATP10515 647 aaKnown RBP20■□□□□ 0.79
HERPUD2-201ENST00000311350 YARSP54577 528 aaKnown RBP20■□□□□ 0.79
HERPUD2-201ENST00000311350 GRM1Q13255 1194 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 ZNF746Q6NUN9 644 aaPredicted RBP20■□□□□ 0.79
HERPUD2-201ENST00000311350 RPUSD2Q8IZ73 545 aaKnown RBP20■□□□□ 0.79
HERPUD2-201ENST00000311350 SYCP3Q8IZU3 236 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 FGD4Q96M96 766 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 UBE2TQ9NPD8 197 aaPredicted RBP20■□□□□ 0.79
HERPUD2-201ENST00000311350 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20■□□□□ 0.79
HERPUD2-201ENST00000311350 LMCD1Q9NZU5 365 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 FAM196BA6NMK8 535 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 TTC4O95801 387 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 VAMP7P51809 220 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 HUNKP57058 714 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 CEP55Q53EZ4 464 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 IRGCQ6NXR0 463 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 DSTYKQ6XUX3 929 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 LRRC8CQ8TDW0 803 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 SPIRE2Q8WWL2 714 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 MIPEPQ99797 713 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 TEKT3Q9BXF9 490 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 UBE2OQ9C0C9 1292 aaKnown RBP20■□□□□ 0.79
HERPUD2-201ENST00000311350 GRID1Q9ULK0 1009 aa20■□□□□ 0.79
HERPUD2-201ENST00000311350 ARHGEF35A5YM69 484 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 ENTPD3O75355 529 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 CYP1A2P05177 515 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 STRN3Q13033 797 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 MOGSQ13724 837 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 TAF1BQ53T94 588 aaPredicted RBP19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 WASHC2DQ5SRD0 308 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 SLC13A5Q86YT5 568 aaPredicted RBP19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 APOBEC3FQ8IUX4 373 aaKnown RBP19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 SCG3Q8WXD2 468 aaKnown RBP19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 INPP5DQ92835 1189 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 RIT2Q99578 217 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 DDX50Q9BQ39 737 aaKnown RBP19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 VCXQ9H320 206 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 EMSYQ7Z589 1322 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 POLR2AP24928 1970 aaKnown RBP19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 ATP5DP30049 168 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 VPS41P49754 854 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 KRT17Q04695 432 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 TCP10Q12799 353 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 CUL3Q13618 768 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 SNX30Q5VWJ9 437 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 ZC3H18Q86VM9 953 aaKnown RBP19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 ACCSQ96QU6 501 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 UNC45AQ9H3U1 944 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 UVRAGQ9P2Y5 699 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 ASIC3Q9UHC3 531 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 SERPINA10Q9UK55 444 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 PCDHAC2Q9Y5I4 1007 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 USH1CQ9Y6N9 552 aa19.99■□□□□ 0.79
HERPUD2-201ENST00000311350 SPDYE2BA6NHP3 402 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 THAP12O43422 761 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 ATP5HO75947 161 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 KRT36O76013 467 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 ECEL1O95672 775 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 SPDYE6P0CI01 402 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 STAT2P52630 851 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 CACNA2D1P54289 1103 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 FAM71AQ8IYT1 594 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 DAW1Q8N136 415 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 GRAMD1AQ96CP6 724 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 RBM41Q96IZ5 413 aaKnown RBP19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 ST6GALNAC4Q9H4F1 302 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 LRRC19Q9H756 370 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 NINJ2Q9NZG7 142 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 SCOCQ9UIL1 159 aa19.98■□□□□ 0.79
HERPUD2-201ENST00000311350 RCN1Q15293 331 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms