RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 NMRK1Q9NWW6 199 aa20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 SFI1A8K8P3 1242 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 MAPK13O15264 365 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 RAD21O60216 631 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 PYGMP11217 842 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 CHRNB2P17787 502 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 PDCD2Q16342 344 aaPredicted RBP20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 RFWD3Q6PCD5 774 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 SAPCD2Q86UD0 394 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 B4GALNT2Q8NHY0 566 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 ITFG2Q969R8 447 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 SERPINB12Q96P63 405 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 TRPM7Q96QT4 1865 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 WDR18Q9BV38 432 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 SLCO1B3Q9NPD5 702 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 FAM198AQ9UFP1 575 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 COILP38432 576 aaPredicted RBP20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 MCCD1P59942 119 aaPredicted RBP20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 GPC5P78333 572 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 CCDC15Q0P6D6 951 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 CETN1Q12798 172 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 DNAJC3Q13217 504 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 CYFIP1Q7L576 1253 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 TPH2Q8IWU9 490 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 ENDOVQ8N8Q3 282 aaKnown RBP20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 CYP2W1Q8TAV3 490 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 KIFAP3Q92845 792 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 GORASP1Q9BQQ3 440 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 SH3BP1Q9Y3L3 701 aa20.05■□□□□ 0.8
HERPUD2-201ENST00000311350 DDTLA6NHG4 134 aaPredicted RBP20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 POLGP54098 1239 aaPredicted RBP20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 COG2Q14746 738 aa20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 ABCB5Q2M3G0 1257 aa20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 KHDC1Q4VXA5 237 aaKnown RBP20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 ZC3H12AQ5D1E8 599 aaKnown RBP20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 PHLDB3Q6NSJ2 640 aa20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 AGGF1Q8N302 714 aaeCLIP20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 ZFAND2BQ8WV99 257 aa20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 PPP1R12CQ9BZL4 782 aa20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 COL2A1P02458 1487 aaPredicted RBP20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 E7ENQ6 273 aa20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 FOXN3O00409 490 aaPredicted RBP20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 GZMAP12544 262 aa20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 CYP2J2P51589 502 aa20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 WDR4P57081 412 aaKnown RBP20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 ACVR2BQ13705 512 aa20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 SEL1L2Q5TEA6 688 aa20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 IFT43Q96FT9 208 aa20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 ZNF333Q96JL9 665 aa20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 METTL5Q9NRN9 209 aaKnown RBP20.04■□□□□ 0.8
HERPUD2-201ENST00000311350 TRIM49P0CI25 452 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 TRIM49CP0CI26 452 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 SSR1P43307 286 aaKnown RBP20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 SNRPFP62306 86 aaKnown RBP20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 TRIP13Q15645 432 aaPredicted RBP20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 TSNAXIP1Q2TAA8 658 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 B3GNT9Q6UX72 402 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 SH3BP5LQ7L8J4 393 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 C12orf50Q8NA57 414 aaPredicted RBP20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 RBBP8NLQ8NC74 664 aaPredicted RBP20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 NRG4Q8WWG1 115 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 LRRC37BQ96QE4 947 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 ATRNL1Q5VV63 1379 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 ZNF536O15090 1300 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 EXOC3O60645 756 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 RANBP1P43487 201 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 IKQ13123 557 aaPredicted RBP20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 RCN2Q14257 317 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 SETDB1Q15047 1291 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 ODR4Q5SWX8 454 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 TRMT10CQ7L0Y3 403 aaKnown RBP20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 CD101Q93033 1021 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 CDCA5Q96FF9 252 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 ZBED3Q96IU2 234 aaPredicted RBP20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 TMEM206Q9H813 350 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 CTTNBP2NLQ9P2B4 639 aa20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 G3BP2Q9UN86 482 aaKnown RBP20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 RBBP6Q7Z6E9 1792 aaKnown RBP20.03■□□□□ 0.8
HERPUD2-201ENST00000311350 SIGLEC16A6NMB1 481 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 ABLIM1O14639 778 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 NVLO15381 856 aaKnown RBP20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 SPAG7O75391 227 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 HSPA1AP0DMV8 641 aaKnown RBP20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 HSPA1BP0DMV9 641 aaKnown RBP20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 HOXA13P31271 388 aaPredicted RBP20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 ECE1P42892 770 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 SNAP25P60880 206 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 MESDQ14696 234 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 DLGAP5Q15398 846 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 ARHGAP44Q17R89 818 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 EPC2Q52LR7 807 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 APBB1IPQ7Z5R6 666 aaPredicted RBP20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 BTBD6Q96KE9 485 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 MTUS1Q9ULD2 1270 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 PRR12Q9ULL5 1215 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 NAALADL1Q9UQQ1 740 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 LOXHD1Q8IVV2 1947 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 GAS7O60861 476 aa20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 FTLP02792 175 aaPredicted RBP20.02■□□□□ 0.8
HERPUD2-201ENST00000311350 COMTP21964 271 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms