RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 PCDHB6Q9Y5E3 794 aa6.22□□□□□ -1.41
PTPRM-207ENST00000578571 ATP10DQ9P241 1426 aa6.22□□□□□ -1.41
PTPRM-207ENST00000578571 USP42Q9H9J4 1324 aaKnown RBP6.22□□□□□ -1.41
PTPRM-207ENST00000578571 QSER1Q2KHR3 1735 aa6.22□□□□□ -1.41
PTPRM-207ENST00000578571 NUP188Q5SRE5 1749 aa6.22□□□□□ -1.41
PTPRM-207ENST00000578571 CARMIL3Q8ND23 1372 aa6.21□□□□□ -1.41
PTPRM-207ENST00000578571 MAFGO15525 162 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 ARHGAP6O43182 974 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 ANXA1P04083 346 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 LPLP06858 475 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 HNRNPLP14866 589 aaKnown RBP eCLIP6.21□□□□□ -1.42
PTPRM-207ENST00000578571 ENPP1P22413 925 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 PIP4K2AP48426 406 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-207ENST00000578571 SCAND1P57086 179 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 NFIXQ14938 502 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 ITPRIPQ8IWB1 547 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 CNTD1Q8N815 330 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 CDYL2Q8N8U2 506 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 EAF2Q96CJ1 260 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-207ENST00000578571 HIST1H2AHQ96KK5 128 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 ACAP3Q96P50 834 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 MYD88Q99836 296 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 HIST1H2AJQ99878 128 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 FDXACB1Q9BRP7 624 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-207ENST00000578571 SSBP3Q9BWW4 388 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-207ENST00000578571 PUS7LQ9H0K6 701 aaKnown RBP6.21□□□□□ -1.42
PTPRM-207ENST00000578571 SEC61A2Q9H9S3 476 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 CWC25Q9NXE8 425 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-207ENST00000578571 C9orf78Q9NZ63 289 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-207ENST00000578571 PPP4R1LQ9P1A2 415 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 PRSS50Q9UI38 385 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 USP18Q9UMW8 372 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 ABCC4O15439 1325 aa6.21□□□□□ -1.42
PTPRM-207ENST00000578571 SCN7AQ01118 1682 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 IBTKQ9P2D0 1353 aaPredicted RBP6.2□□□□□ -1.42
PTPRM-207ENST00000578571 UBR3Q6ZT12 1888 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 C2orf78A6NCI8 922 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 GOLGA8AA7E2F4 631 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 GOLGA8BA8MQT2 603 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 SEC24DO94855 1032 aaPredicted RBP6.2□□□□□ -1.42
PTPRM-207ENST00000578571 CAMTA2O94983 1202 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 UBTFL1P0CB47 393 aaPredicted RBP6.2□□□□□ -1.42
PTPRM-207ENST00000578571 TRIM27P14373 513 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 GPR3P46089 330 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 GUCY2FP51841 1108 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 CTSWP56202 376 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 SESN2P58004 480 aaPredicted RBP6.2□□□□□ -1.42
PTPRM-207ENST00000578571 PPARAQ07869 468 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 TCIRG1Q13488 830 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 PROSER3Q2NL68 480 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 LCE4AQ5TA78 99 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 GAREM2Q75VX8 874 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 CLEC14AQ86T13 490 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 RPUSD2Q8IZ73 545 aaKnown RBP6.2□□□□□ -1.42
PTPRM-207ENST00000578571 OR14K1Q8NGZ2 314 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 TGFBRAP1Q8WUH2 860 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 GAB3Q8WWW8 586 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 GFM2Q969S9 779 aaKnown RBP6.2□□□□□ -1.42
PTPRM-207ENST00000578571 NEIL1Q96FI4 390 aaPredicted RBP6.2□□□□□ -1.42
PTPRM-207ENST00000578571 RBM15Q96T37 977 aaKnown RBP eCLIP6.2□□□□□ -1.42
PTPRM-207ENST00000578571 OSBPL6Q9BZF3 934 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 KCTD10Q9H3F6 313 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 EVLQ9UI08 416 aaPredicted RBP6.2□□□□□ -1.42
PTPRM-207ENST00000578571 FAM184BQ9ULE4 1060 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 SYNPO2Q9UMS6 1093 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 NIP7Q9Y221 180 aaKnown RBP eCLIP6.2□□□□□ -1.42
PTPRM-207ENST00000578571 NOP58Q9Y2X3 529 aaKnown RBP6.2□□□□□ -1.42
PTPRM-207ENST00000578571 NR2E1Q9Y466 385 aa6.2□□□□□ -1.42
PTPRM-207ENST00000578571 BCORQ6W2J9 1755 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 ARFGEF2Q9Y6D5 1785 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 MYH14Q7Z406 1995 aaKnown RBP6.19□□□□□ -1.42
PTPRM-207ENST00000578571 HMMRO75330 724 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 H2AFYO75367 372 aaKnown RBP6.19□□□□□ -1.42
PTPRM-207ENST00000578571 GPR15P49685 360 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 MTMR1Q13613 665 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 MVPQ14764 893 aaKnown RBP6.19□□□□□ -1.42
PTPRM-207ENST00000578571 UGT8Q16880 541 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPRM-207ENST00000578571 ZNF568Q3ZCX4 644 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 ERICH6BQ5W0A0 696 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 SLFN13Q68D06 897 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 G2E3Q7L622 706 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 NBPF5PQ86XG9 351 aaPredicted RBP6.19□□□□□ -1.42
PTPRM-207ENST00000578571 COL23A1Q86Y22 540 aaPredicted RBP6.19□□□□□ -1.42
PTPRM-207ENST00000578571 CBARPQ8N350 705 aaPredicted RBP6.19□□□□□ -1.42
PTPRM-207ENST00000578571 CNBD1Q8NA66 436 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 CXorf38Q8TB03 319 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 RSAD2Q8WXG1 361 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 LMF1Q96S06 567 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 MENTQ9BUN1 341 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 UTP14AQ9BVJ6 771 aaKnown RBP6.19□□□□□ -1.42
PTPRM-207ENST00000578571 TRMT112Q9UI30 125 aaKnown RBP6.19□□□□□ -1.42
PTPRM-207ENST00000578571 EDARQ9UNE0 448 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 EP400Q96L91 3159 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 ZNF536O15090 1300 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 PNPLA7Q6ZV29 1317 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 SH3TC1Q8TE82 1336 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 C4AP0C0L4 1744 aa6.19□□□□□ -1.42
PTPRM-207ENST00000578571 ADCY9O60503 1353 aa6.18□□□□□ -1.42
PTPRM-207ENST00000578571 ANKRD36CQ5JPF3 1778 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms