RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 SLC1A5Q15758 541 aa21.64■■□□□ 1.06
RUNX3-202ENST00000338888 PKN2Q16513 984 aaKnown RBP21.64■■□□□ 1.06
RUNX3-202ENST00000338888 QRICH1Q2TAL8 776 aa21.64■■□□□ 1.06
RUNX3-202ENST00000338888 OTOAQ7RTW8 1153 aa21.64■■□□□ 1.06
RUNX3-202ENST00000338888 DRAXINQ8NBI3 349 aaPredicted RBP21.64■■□□□ 1.06
RUNX3-202ENST00000338888 DTX3LQ8TDB6 740 aa21.64■■□□□ 1.06
RUNX3-202ENST00000338888 EZH1Q92800 747 aaPredicted RBP21.64■■□□□ 1.06
RUNX3-202ENST00000338888 MROH7Q68CQ1 1323 aa21.64■■□□□ 1.05
RUNX3-202ENST00000338888 KRT15P19012 456 aa21.64■■□□□ 1.05
RUNX3-202ENST00000338888 NFIL3Q16649 462 aa21.64■■□□□ 1.05
RUNX3-202ENST00000338888 CCNJLQ8IV13 435 aa21.64■■□□□ 1.05
RUNX3-202ENST00000338888 EPS8L1Q8TE68 723 aa21.64■■□□□ 1.05
RUNX3-202ENST00000338888 LENG9Q96B70 501 aa21.64■■□□□ 1.05
RUNX3-202ENST00000338888 DCLK3Q9C098 648 aa21.64■■□□□ 1.05
RUNX3-202ENST00000338888 KIAA1586Q9HCI6 787 aa21.64■■□□□ 1.05
RUNX3-202ENST00000338888 RPL26L1Q9UNX3 145 aaKnown RBP21.64■■□□□ 1.05
RUNX3-202ENST00000338888 CAPN9O14815 690 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 FGFR1P11362 822 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 CA4P22748 312 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 GCAP28676 217 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 KPNB1Q14974 876 aaKnown RBP21.63■■□□□ 1.05
RUNX3-202ENST00000338888 ACSBG2Q5FVE4 666 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 HP1BP3Q5SSJ5 553 aaPredicted RBP21.63■■□□□ 1.05
RUNX3-202ENST00000338888 CLNKQ7Z7G1 428 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 CYP2W1Q8TAV3 490 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 PLVAPQ9BX97 442 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 PARVGQ9HBI0 331 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 DCTN4Q9UJW0 460 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.63■■□□□ 1.05
RUNX3-202ENST00000338888 MEIS2O14770 477 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 CYP26A1O43174 497 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 MUTP22033 750 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 TM4SF1P30408 202 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 MAGEA4P43358 317 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 CUL3Q13618 768 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 PLEKHG4Q58EX7 1191 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 SLC45A4Q5BKX6 768 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 IZUMO3Q5VZ72 239 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 SYDE1Q6ZW31 735 aaPredicted RBP21.63■■□□□ 1.05
RUNX3-202ENST00000338888 ZNF720Q7Z2F6 126 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 SLC47A2Q86VL8 602 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 ATL2Q8NHH9 583 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 GRK7Q8WTQ7 553 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 RBM15Q96T37 977 aaKnown RBP eCLIP21.63■■□□□ 1.05
RUNX3-202ENST00000338888 HEMGNQ9BXL5 484 aa21.63■■□□□ 1.05
RUNX3-202ENST00000338888 CYP1A2P05177 515 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 RFX1P22670 979 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 GCLMP48507 274 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 LMNB2Q03252 620 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 RGS9BPQ6ZS82 235 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 CAPN12Q6ZSI9 719 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 TPH2Q8IWU9 490 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 FAM178BQ8IXR5 827 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 B4GALNT2Q8NHY0 566 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 TRAPPC9Q96Q05 1148 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 PCIF1Q9H4Z3 704 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 LNPEPQ9UIQ6 1025 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 NOCTQ9UK39 431 aaKnown RBP21.62■■□□□ 1.05
RUNX3-202ENST00000338888 MSH4O15457 936 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 TBX10O75333 385 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 GZMAP12544 262 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 OCRLQ01968 901 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 PPP3CAQ08209 521 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 CTC1Q2NKJ3 1217 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 TBC1D25Q3MII6 688 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 HHATQ5VTY9 493 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 LRRC74BQ6ZQY2 392 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 SMC6Q96SB8 1091 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 FIZ1Q96SL8 496 aa21.62■■□□□ 1.05
RUNX3-202ENST00000338888 IGKV6D-41A0A0C4DH26 115 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 PRPF4O43172 522 aaKnown RBP eCLIP21.61■■□□□ 1.05
RUNX3-202ENST00000338888 LGR5O75473 907 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 GSTA2P09210 222 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 RXRBP28702 533 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 SSR1P43307 286 aaKnown RBP21.61■■□□□ 1.05
RUNX3-202ENST00000338888 GPATCH4Q5T3I0 446 aaKnown RBP21.61■■□□□ 1.05
RUNX3-202ENST00000338888 C1orf186Q6ZWK4 172 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 ZNF365Q70YC5 407 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 SYCP3Q8IZU3 236 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 CFAP69A5D8W1 941 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 TJP3O95049 919 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 GYS1P13807 737 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 SLC34A1Q06495 639 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 RIBC1Q8N443 379 aaPredicted RBP21.61■■□□□ 1.05
RUNX3-202ENST00000338888 CYLDQ9NQC7 956 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 VAV3Q9UKW4 847 aa21.61■■□□□ 1.05
RUNX3-202ENST00000338888 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.61■■□□□ 1.05
RUNX3-202ENST00000338888 WDR91A4D1P6 747 aa21.6■■□□□ 1.05
RUNX3-202ENST00000338888 C2CD2LO14523 706 aa21.6■■□□□ 1.05
RUNX3-202ENST00000338888 TBX3O15119 743 aa21.6■■□□□ 1.05
RUNX3-202ENST00000338888 PYGLP06737 847 aa21.6■■□□□ 1.05
RUNX3-202ENST00000338888 SERPINB4P48594 390 aa21.6■■□□□ 1.05
RUNX3-202ENST00000338888 SNAP25P60880 206 aa21.6■■□□□ 1.05
RUNX3-202ENST00000338888 FMO1Q01740 532 aa21.6■■□□□ 1.05
RUNX3-202ENST00000338888 OVGP1Q12889 678 aa21.6■■□□□ 1.05
RUNX3-202ENST00000338888 CERKLQ49MI3 558 aaPredicted RBP21.6■■□□□ 1.05
RUNX3-202ENST00000338888 Q4G0T1 1027 aa21.6■■□□□ 1.05
RUNX3-202ENST00000338888 MOXD1Q6UVY6 613 aa21.6■■□□□ 1.05
RUNX3-202ENST00000338888 ARHGAP22Q7Z5H3 698 aa21.6■■□□□ 1.05
RUNX3-202ENST00000338888 CRYGNQ8WXF5 182 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms