RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 NMT1P30419 496 aaKnown RBP20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 ALDH3A1P30838 453 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 CHKAP35790 457 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 ZNF76P36508 570 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 RBM5P52756 815 aaKnown RBP eCLIP20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 FKBP1AP62942 108 aaKnown RBP20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 LAMB3Q13751 1172 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 RRP1BQ14684 758 aaKnown RBP20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 DEFB115Q30KQ5 88 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 MTHFD1LQ6UB35 978 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 CPNE8Q86YQ8 564 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 SULF1Q8IWU6 871 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 UBL4BQ8N7F7 174 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 SLC5A5Q92911 643 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 ART4Q93070 314 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 EPAS1Q99814 870 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 ZNF408Q9H9D4 720 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 AAASQ9NRG9 546 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 ALG6Q9Y672 507 aa20.1■□□□□ 0.81
HERPUD2-201ENST00000311350 RNF8O76064 485 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 SLITRK3O94933 977 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 CETPP11597 493 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 CTNNA2P26232 953 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 CRKP46108 304 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 KLC1Q07866 573 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 ANGEL2Q5VTE6 544 aaKnown RBP20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 DNAJC9Q8WXX5 260 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 SPOCK2Q92563 424 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 AGPAT1Q99943 283 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 STRA6Q9BX79 667 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 RGL1Q9NZL6 768 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 CHKBQ9Y259 395 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 ADM5C9JUS6 153 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 SMAPO00193 183 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 BCRP11274 1271 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 ALAS1P13196 640 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 TAC1P20366 129 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 SKIV2L2P42285 1042 aaKnown RBP20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 MTFR1Q15390 333 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 CBWD6Q4V339 395 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 CBWD3Q5JTY5 395 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 CBWD5Q5RIA9 395 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 DLK2Q6UY11 383 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 CCDC105Q8IYK2 499 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 PWWP2AQ96N64 755 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 ANKRD27Q96NW4 1050 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 PAIP2Q9BPZ3 127 aaKnown RBP20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 TBC1D10AQ9BXI6 508 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 LRMDAQ9H2I8 198 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 USP20Q9Y2K6 914 aa20.09■□□□□ 0.81
HERPUD2-201ENST00000311350 NDUFB10O96000 172 aa20.08■□□□□ 0.81
HERPUD2-201ENST00000311350 VEGFBP49765 207 aa20.08■□□□□ 0.81
HERPUD2-201ENST00000311350 LBRQ14739 615 aaKnown RBP20.08■□□□□ 0.81
HERPUD2-201ENST00000311350 LMO3Q8TAP4 145 aa20.08■□□□□ 0.81
HERPUD2-201ENST00000311350 NACC1Q96RE7 527 aa20.08■□□□□ 0.81
HERPUD2-201ENST00000311350 PITPNM3Q9BZ71 974 aa20.08■□□□□ 0.81
HERPUD2-201ENST00000311350 DENND2DQ9H6A0 471 aaPredicted RBP20.08■□□□□ 0.81
HERPUD2-201ENST00000311350 TXLNGQ9NUQ3 528 aa20.08■□□□□ 0.81
HERPUD2-201ENST00000311350 PCMTD2Q9NV79 361 aa20.08■□□□□ 0.81
HERPUD2-201ENST00000311350 TLL2Q9Y6L7 1015 aa20.08■□□□□ 0.81
HERPUD2-201ENST00000311350 CBX6O95503 412 aa20.08■□□□□ 0.8
HERPUD2-201ENST00000311350 T-ENOLP0DO92 83 aa20.08■□□□□ 0.8
HERPUD2-201ENST00000311350 BFSP1Q12934 665 aa20.08■□□□□ 0.8
HERPUD2-201ENST00000311350 PARP6Q2NL67 630 aa20.08■□□□□ 0.8
HERPUD2-201ENST00000311350 ZNF568Q3ZCX4 644 aa20.08■□□□□ 0.8
HERPUD2-201ENST00000311350 OR52E8Q6IFG1 317 aa20.08■□□□□ 0.8
HERPUD2-201ENST00000311350 INTS8Q75QN2 995 aaKnown RBP20.08■□□□□ 0.8
HERPUD2-201ENST00000311350 ZFPM1Q8IX07 1006 aa20.08■□□□□ 0.8
HERPUD2-201ENST00000311350 FAM178BQ8IXR5 827 aa20.08■□□□□ 0.8
HERPUD2-201ENST00000311350 EZH1Q92800 747 aaPredicted RBP20.08■□□□□ 0.8
HERPUD2-201ENST00000311350 SLC7A6OSQ96CW6 309 aaPredicted RBP20.08■□□□□ 0.8
HERPUD2-201ENST00000311350 TP73O15350 636 aa20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 BMP3P12645 472 aa20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 CNGA1P29973 690 aa20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 ALCAMQ13740 583 aa20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 CYP1B1Q16678 543 aa20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 PRUNE1Q86TP1 453 aa20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 DRAXINQ8NBI3 349 aaPredicted RBP20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 DYDC2Q96IM9 177 aa20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 ROPN1BQ9BZX4 212 aaPredicted RBP20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 ROPN1Q9HAT0 212 aaPredicted RBP20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 WNT10BO00744 389 aa20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 MAPTP10636 758 aaKnown RBP20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 KYNUQ16719 465 aa20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 SGSM1Q2NKQ1 1148 aa20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 SRRM1Q8IYB3 904 aaKnown RBP20.07■□□□□ 0.8
HERPUD2-201ENST00000311350 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.07■□□□□ 0.82e-7■■■■■ 278.5
HERPUD2-201ENST00000311350 PMM2O15305 246 aa20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 ACADSP16219 412 aa20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 MUM1Q2TAK8 710 aa20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 USH1GQ495M9 461 aa20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 ZC2HC1CQ53FD0 456 aaPredicted RBP20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 C12orf56Q8IXR9 622 aa20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 FAM136AQ96C01 138 aa20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 MAGEB18Q96M61 343 aa20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 ZSWIM1Q9BR11 485 aa20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 WDR11Q9BZH6 1224 aa20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 TRIM4Q9C037 500 aa20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 WNT8AQ9H1J5 351 aa20.06■□□□□ 0.8
HERPUD2-201ENST00000311350 EHMT1Q9H9B1 1298 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms