RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 ZPBP2Q6X784 338 aa25.28■■□□□ 1.64
LSM7-202ENST00000585395 FMR1NBQ8N0W7 255 aaPredicted RBP25.28■■□□□ 1.64
LSM7-202ENST00000585395 SLC39A11Q8N1S5 342 aa25.28■■□□□ 1.64
LSM7-202ENST00000585395 RPS6KC1Q96S38 1066 aa25.28■■□□□ 1.64
LSM7-202ENST00000585395 TCF25Q9BQ70 676 aa25.28■■□□□ 1.64
LSM7-202ENST00000585395 NXF3Q9H4D5 531 aaKnown RBP25.28■■□□□ 1.64
LSM7-202ENST00000585395 NRDE2Q9H7Z3 1164 aa25.28■■□□□ 1.64
LSM7-202ENST00000585395 TLE6Q9H808 572 aa25.28■■□□□ 1.64
LSM7-202ENST00000585395 TNFSF13BQ9Y275 285 aa25.28■■□□□ 1.64
LSM7-202ENST00000585395 TDRD15B5MCY1 1934 aaKnown RBP25.27■■□□□ 1.64
LSM7-202ENST00000585395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.27■■□□□ 1.64
LSM7-202ENST00000585395 PRPF40AO75400 957 aaKnown RBP25.27■■□□□ 1.64
LSM7-202ENST00000585395 NRIP1P48552 1158 aa25.27■■□□□ 1.64
LSM7-202ENST00000585395 NDUFV1P49821 464 aa25.27■■□□□ 1.64
LSM7-202ENST00000585395 GTF2BQ00403 316 aa25.27■■□□□ 1.64
LSM7-202ENST00000585395 DLX2Q07687 328 aaPredicted RBP25.27■■□□□ 1.64
LSM7-202ENST00000585395 COASYQ13057 564 aa25.27■■□□□ 1.64
LSM7-202ENST00000585395 CLUL1Q15846 466 aa25.27■■□□□ 1.64
LSM7-202ENST00000585395 ZNF720Q7Z2F6 126 aa25.27■■□□□ 1.64
LSM7-202ENST00000585395 TMC7Q7Z402 723 aa25.27■■□□□ 1.64
LSM7-202ENST00000585395 GAD1Q99259 594 aa25.27■■□□□ 1.64
LSM7-202ENST00000585395 TCHPQ9BT92 498 aa25.27■■□□□ 1.64
LSM7-202ENST00000585395 BLZF1Q9H2G9 400 aa25.27■■□□□ 1.64
LSM7-202ENST00000585395 TBX20Q9UMR3 447 aa25.27■■□□□ 1.64
LSM7-202ENST00000585395 GCNT3O95395 438 aa25.26■■□□□ 1.63
LSM7-202ENST00000585395 NMT1P30419 496 aaKnown RBP25.26■■□□□ 1.63
LSM7-202ENST00000585395 TRIM67Q6ZTA4 783 aa25.26■■□□□ 1.63
LSM7-202ENST00000585395 ADGRD2Q7Z7M1 963 aa25.26■■□□□ 1.63
LSM7-202ENST00000585395 PBXIP1Q96AQ6 731 aa25.26■■□□□ 1.63
LSM7-202ENST00000585395 PDZD7Q9H5P4 517 aa25.26■■□□□ 1.63
LSM7-202ENST00000585395 EXOC1Q9NV70 894 aa25.26■■□□□ 1.63
LSM7-202ENST00000585395 GIT1Q9Y2X7 761 aa25.26■■□□□ 1.63
LSM7-202ENST00000585395 PCDHGC5Q9Y5F6 944 aa25.26■■□□□ 1.63
LSM7-202ENST00000585395 TMEM221A6NGB7 291 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 M0R296 226 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 NR1I2O75469 434 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 AKAP5P24588 427 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 LIG4P49917 911 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 ERVFC1P60507 584 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 PSMD2Q13200 908 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 CUL4BQ13620 913 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 FAM26FQ5R3K3 315 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 IER5LQ5T953 404 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 SUGP1Q8IWZ8 645 aaKnown RBP25.25■■□□□ 1.63
LSM7-202ENST00000585395 ENGASEQ8NFI3 743 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 ACCSQ96QU6 501 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 ACO2Q99798 780 aaKnown RBP25.25■■□□□ 1.63
LSM7-202ENST00000585395 RNF39Q9H2S5 420 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 TMEM206Q9H813 350 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 NGRNQ9NPE2 291 aaKnown RBP25.25■■□□□ 1.63
LSM7-202ENST00000585395 DNAJB4Q9UDY4 337 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 CD207Q9UJ71 328 aa25.25■■□□□ 1.63
LSM7-202ENST00000585395 FSD2A1L4K1 749 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 ARL5CA6NH57 179 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 HNRNPDLO14979 420 aaKnown RBP25.24■■□□□ 1.63
LSM7-202ENST00000585395 TOM1L1O75674 476 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 GALTP07902 379 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 GTF2F1P35269 517 aaKnown RBP eCLIP25.24■■□□□ 1.634e-6■■□□□ 12.3
LSM7-202ENST00000585395 MATR3P43243 847 aaKnown RBP eCLIP25.24■■□□□ 1.63
LSM7-202ENST00000585395 SCNN1GP51170 649 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 SMC1AQ14683 1233 aaKnown RBP25.24■■□□□ 1.63
LSM7-202ENST00000585395 ZNF568Q3ZCX4 644 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 NT5DC1Q5TFE4 455 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 ZNF280BQ86YH2 543 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 MAP4K3Q8IVH8 894 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 ELOA2Q8IYF1 753 aaPredicted RBP25.24■■□□□ 1.63
LSM7-202ENST00000585395 GRAMD1CQ8IYS0 662 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 FIZ1Q96SL8 496 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 TMEM175Q9BSA9 504 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 TARS2Q9BW92 718 aaKnown RBP25.24■■□□□ 1.63
LSM7-202ENST00000585395 TBC1D7Q9P0N9 293 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 USP20Q9Y2K6 914 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 FAN1Q9Y2M0 1017 aa25.24■■□□□ 1.63
LSM7-202ENST00000585395 ZFHX2Q9C0A1 2572 aaPredicted RBP25.23■■□□□ 1.63
LSM7-202ENST00000585395 GADD45BO75293 160 aaPredicted RBP25.23■■□□□ 1.63
LSM7-202ENST00000585395 TBX10O75333 385 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 SMC2O95347 1197 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 ALDH2P05091 517 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 SRGAP2BP0DMP2 458 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 MCF2P10911 925 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 OR1G1P47890 313 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 SLC11A1P49279 550 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 SNW1Q13573 536 aaKnown RBP25.23■■□□□ 1.63
LSM7-202ENST00000585395 POSTNQ15063 836 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 MPZL3Q6UWV2 235 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 TAS1R3Q7RTX0 852 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 IGSF21Q96ID5 467 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 ZFP42Q96MM3 310 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 GTPBP4Q9BZE4 634 aaKnown RBP25.23■■□□□ 1.63
LSM7-202ENST00000585395 RMND1Q9NWS8 449 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 KLK14Q9P0G3 267 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 ZDBF2Q9HCK1 2354 aa25.23■■□□□ 1.63
LSM7-202ENST00000585395 ZMYM2Q9UBW7 1377 aa25.22■■□□□ 1.63
LSM7-202ENST00000585395 UBE4BO95155 1302 aa25.22■■□□□ 1.63
LSM7-202ENST00000585395 PER2O15055 1255 aa25.22■■□□□ 1.63
LSM7-202ENST00000585395 EIF3DO15371 548 aaKnown RBP eCLIP25.22■■□□□ 1.63
LSM7-202ENST00000585395 CLDN3O15551 220 aa25.22■■□□□ 1.63
LSM7-202ENST00000585395 DDHD2O94830 711 aa25.22■■□□□ 1.63
LSM7-202ENST00000585395 KIF20AO95235 890 aa25.22■■□□□ 1.63
LSM7-202ENST00000585395 PIGRP01833 764 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms