RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 DDX21Q9NR30 783 aaKnown RBP eCLIP6.29□□□□□ -1.4
PTPRM-207ENST00000578571 TOPORSQ9NS56 1045 aaPredicted RBP6.29□□□□□ -1.4
PTPRM-207ENST00000578571 STK32BQ9NY57 414 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 ATP8A1Q9Y2Q0 1164 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 TNS1Q9HBL0 1735 aaKnown RBP6.28□□□□□ -1.4
PTPRM-207ENST00000578571 KCNQ3O43525 872 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 KDM1AO60341 852 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 HMGCRP04035 888 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 CNR2P34972 360 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 NEXNQ0ZGT2 675 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 MAP3K12Q12852 859 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 USP10Q14694 798 aaKnown RBP6.28□□□□□ -1.4
PTPRM-207ENST00000578571 PDCD1Q15116 288 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 HSP90AB3PQ58FF7 597 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 RNF219Q5W0B1 726 aaPredicted RBP6.28□□□□□ -1.4
PTPRM-207ENST00000578571 BORAQ6PGQ7 559 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 ESPNLQ6ZVH7 1005 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 RALYLQ86SE5 291 aaKnown RBP6.28□□□□□ -1.4
PTPRM-207ENST00000578571 SPATS2Q86XZ4 545 aaKnown RBP6.28□□□□□ -1.4
PTPRM-207ENST00000578571 DNAJC10Q8IXB1 793 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 FTSJ3Q8IY81 847 aaKnown RBP6.28□□□□□ -1.4
PTPRM-207ENST00000578571 LGI4Q8N135 537 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 C8orf58Q8NAV2 365 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 ATL2Q8NHH9 583 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 COG1Q8WTW3 980 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 GPATCH3Q96I76 525 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 API5Q9BZZ5 524 aaKnown RBP6.28□□□□□ -1.4
PTPRM-207ENST00000578571 MTG2Q9H4K7 406 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 PCDH12Q9NPG4 1184 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 KCMF1Q9P0J7 381 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 MAGEL2Q9UJ55 1249 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 MCM8Q9UJA3 840 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 DENND2AQ9ULE3 1009 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 HDAC5Q9UQL6 1122 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 INVSQ9Y283 1065 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 COL4A3BPQ9Y5P4 624 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 PPP2R3BQ9Y5P8 575 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 C5P01031 1676 aa6.28□□□□□ -1.4
PTPRM-207ENST00000578571 CACNA1FO60840 1977 aa6.27□□□□□ -1.4
PTPRM-207ENST00000578571 A0A0A6YYJ9 748 aa6.27□□□□□ -1.41
PTPRM-207ENST00000578571 PRSS38A1L453 326 aa6.27□□□□□ -1.41
PTPRM-207ENST00000578571 ANKRD62A6NC57 917 aa6.27□□□□□ -1.41
PTPRM-207ENST00000578571 PRICKLE3O43900 615 aaPredicted RBP6.27□□□□□ -1.41
PTPRM-207ENST00000578571 RAB11FIP3O75154 756 aa6.27□□□□□ -1.41
PTPRM-207ENST00000578571 CYP19A1P11511 503 aaPredicted RBP6.27□□□□□ -1.41
PTPRM-207ENST00000578571 MYL6BP14649 208 aa6.27□□□□□ -1.41
PTPRM-207ENST00000578571 CRKLP46109 303 aaKnown RBP6.27□□□□□ -1.41
PTPRM-207ENST00000578571 CDKN1CP49918 316 aaPredicted RBP6.27□□□□□ -1.41
PTPRM-207ENST00000578571 STAT5BP51692 787 aa6.27□□□□□ -1.41
PTPRM-207ENST00000578571 RARSP54136 660 aaKnown RBP6.27□□□□□ -1.41
PTPRM-207ENST00000578571 MANFP55145 182 aaKnown RBP6.27□□□□□ -1.41
PTPRM-207ENST00000578571 ZFYVE27Q5T4F4 411 aa6.27□□□□□ -1.41
PTPRM-207ENST00000578571 FERMT3Q86UX7 667 aa6.27□□□□□ -1.41
PTPRM-207ENST00000578571 RPGRQ92834 1020 aaKnown RBP6.27□□□□□ -1.41
PTPRM-207ENST00000578571 C20orf173Q96LM9 149 aa6.27□□□□□ -1.41
PTPRM-207ENST00000578571 KIAA1683Q9H0B3 1180 aa6.27□□□□□ -1.41
PTPRM-207ENST00000578571 TFCP2L1Q9NZI6 479 aa6.27□□□□□ -1.41
PTPRM-207ENST00000578571 CHPF2Q9P2E5 772 aa6.27□□□□□ -1.41
PTPRM-207ENST00000578571 NOC2LQ9Y3T9 749 aaKnown RBP6.27□□□□□ -1.41
PTPRM-207ENST00000578571 TJP1Q07157 1748 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 B4GALT4O60513 344 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 OPHN1O60890 802 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 RPS6KA4O75676 772 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 PRKD3O94806 890 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 PFKMP08237 780 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 HSP90B1P14625 803 aaKnown RBP6.26□□□□□ -1.41
PTPRM-207ENST00000578571 RFC4P35249 363 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 RRADP55042 308 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 PCOLCEQ15113 449 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 DGKDQ16760 1214 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 KRT24Q2M2I5 525 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 ZKSCAN2Q63HK3 967 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 IQSEC1Q6DN90 963 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 BMP8AQ7Z5Y6 402 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 TSPYL6Q8N831 410 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 ARHGAP45Q92619 1136 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 FRAT1Q92837 279 aaPredicted RBP6.26□□□□□ -1.41
PTPRM-207ENST00000578571 NKD2Q969F2 451 aaPredicted RBP6.26□□□□□ -1.41
PTPRM-207ENST00000578571 FERMT2Q96AC1 680 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 TEPSINQ96N21 525 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 RTEL1Q9NZ71 1219 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 RAPGEFL1Q9UHV5 662 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 TMPRSS11EQ9UL52 423 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 USP16Q9Y5T5 823 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 COL15A1P39059 1388 aa6.26□□□□□ -1.41
PTPRM-207ENST00000578571 MYPNQ86TC9 1320 aa6.25□□□□□ -1.41
PTPRM-207ENST00000578571 C4BP0C0L5 1744 aa6.25□□□□□ -1.41
PTPRM-207ENST00000578571 COL5A3P25940 1745 aaPredicted RBP6.25□□□□□ -1.41
PTPRM-207ENST00000578571 NPHP1O15259 732 aa6.25□□□□□ -1.41
PTPRM-207ENST00000578571 CNOT4O95628 575 aaKnown RBP6.25□□□□□ -1.41
PTPRM-207ENST00000578571 A1BGP04217 495 aa6.25□□□□□ -1.41
PTPRM-207ENST00000578571 CLEC2LP0C7M8 214 aa6.25□□□□□ -1.41
PTPRM-207ENST00000578571 CDK11BP21127 795 aaKnown RBP6.25□□□□□ -1.41
PTPRM-207ENST00000578571 MRE11P49959 708 aa6.25□□□□□ -1.41
PTPRM-207ENST00000578571 ITPK1Q13572 414 aa6.25□□□□□ -1.41
PTPRM-207ENST00000578571 EZH2Q15910 746 aaKnown RBP6.25□□□□□ -1.41
PTPRM-207ENST00000578571 TBR1Q16650 682 aa6.25□□□□□ -1.41
PTPRM-207ENST00000578571 PTPROQ16827 1216 aa6.25□□□□□ -1.41
PTPRM-207ENST00000578571 ATF7IPQ6VMQ6 1270 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms