RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 PKNOX2Q96KN3 472 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 RPGRIP1Q96KN7 1286 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 CAPZA3Q96KX2 299 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 CCDC42Q96M95 316 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 DMRTB1Q96MA1 342 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 FAM20AQ96MK3 541 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 NSUN5Q96P11 429 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 INPP4AQ96PE3 977 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 FIZ1Q96SL8 496 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 OSBPL9Q96SU4 736 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 GMLQ99445 158 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 EIF2AK1Q9BQI3 630 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 REEP2Q9BRK0 252 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 POLR3CQ9BUI4 534 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 WDR18Q9BV38 432 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 TLR10Q9BXR5 811 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 IFIH1Q9BYX4 1025 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 NIF3L1Q9GZT8 377 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 GBP3Q9H0R5 595 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 RANBP17Q9H2T7 1088 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 MMRN2Q9H8L6 949 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 PDE11AQ9HCR9 933 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ZCCHC17Q9NP64 241 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SIX2Q9NPC8 291 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 PLCB1Q9NQ66 1216 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 TPSG1Q9NRR2 321 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ABI2Q9NYB9 513 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SMARCAL1Q9NZC9 954 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 AIPL1Q9NZN9 384 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 CNTN3Q9P232 1028 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 AJAP1Q9UKB5 411 aaPredicted RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 FAM184BQ9ULE4 1060 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 HPCAL4Q9UM19 191 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SYNPO2Q9UMS6 1093 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 PCDHA12Q9UN75 941 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 TRAF3IP3Q9Y228 551 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 STXBP5LQ9Y2K9 1186 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 HYOU1Q9Y4L1 999 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 TRIM17Q9Y577 477 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 SAR1BQ9Y6B6 198 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 A0A0C4DFX4 3053 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 DICER1Q9UPY3 1922 aaKnown RBP2.99□□□□□ -1.93
LINC00407-201ENST00000426509 ZMYM2Q9UBW7 1377 aa2.99□□□□□ -1.93
LINC00407-201ENST00000426509 UBE4BO95155 1302 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 FRMPD4Q14CM0 1322 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 RPTORQ8N122 1335 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 PAPPA2Q9BXP8 1791 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 A0A087X0T9 212 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 CLRN2A0PK11 232 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 GRID2IPA4D2P6 1211 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 BTNL10A8MVZ5 291 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 TCP10L2B9ZVM9 353 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 C9orf172C9J069 976 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 AGPSO00116 658 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 PDXKO00764 312 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 EREGO14944 169 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 CETN3O15182 167 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 EIF3DO15371 548 aaKnown RBP eCLIP2.98□□□□□ -1.93
LINC00407-201ENST00000426509 SLC16A3O15427 465 aaKnown RBP2.98□□□□□ -1.93
LINC00407-201ENST00000426509 TGFB1I1O43294 461 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 PPIP5K2O43314 1243 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 CALUO43852 315 aaPredicted RBP2.98□□□□□ -1.93
LINC00407-201ENST00000426509 MARCH6O60337 910 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 PLA2G6O60733 806 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 USO1O60763 962 aaKnown RBP2.98□□□□□ -1.93
LINC00407-201ENST00000426509 FKTNO75072 461 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 PHACTR2O75167 634 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 ERLIN1O75477 346 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 AKAP3O75969 853 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 IPO7O95373 1038 aaKnown RBP2.98□□□□□ -1.93
LINC00407-201ENST00000426509 SYF2O95926 243 aaKnown RBP2.98□□□□□ -1.93
LINC00407-201ENST00000426509 NR3C1P04150 777 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 SERPING1P05155 500 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 PSAPP07602 524 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 VIL1P09327 827 aaKnown RBP2.98□□□□□ -1.93
LINC00407-201ENST00000426509 FAM228BP0C875 321 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 ARP10275 920 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 ACTN1P12814 892 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 ELNP15502 786 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 TCP1P17987 556 aaKnown RBP2.98□□□□□ -1.93
LINC00407-201ENST00000426509 SLC9A1P19634 815 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 NR2F2P24468 414 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 KLRC1P26715 233 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 PON1P27169 355 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 TNFRSF8P28908 595 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 PRKCIP41743 596 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 MAPK8P45983 427 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 TM4SF4P48230 202 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 AARSP49588 968 aaKnown RBP eCLIP2.98□□□□□ -1.93
LINC00407-201ENST00000426509 CASP4P49662 377 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 ZNF131P52739 623 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 RBM5P52756 815 aaKnown RBP eCLIP2.98□□□□□ -1.93
LINC00407-201ENST00000426509 GYS2P54840 703 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 JAM2P57087 298 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 POLR2FP61218 127 aaKnown RBP2.98□□□□□ -1.93
LINC00407-201ENST00000426509 TAGLNQ01995 201 aaKnown RBP2.98□□□□□ -1.93
LINC00407-201ENST00000426509 CYP4A11Q02928 519 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 KIF5AQ12840 1032 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 MAPK7Q13164 816 aa2.98□□□□□ -1.93
LINC00407-201ENST00000426509 PPP2R5CQ13362 524 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms