RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 KIF16BQ96L93 1317 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 RGPD3A6NKT7 1758 aaPredicted RBP6.32□□□□□ -1.4
PTPRM-207ENST00000578571 RGPD4Q7Z3J3 1758 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 ELL2O00472 640 aaPredicted RBP6.32□□□□□ -1.4
PTPRM-207ENST00000578571 CUTAO60888 179 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 DDX58O95786 925 aaKnown RBP6.32□□□□□ -1.4
PTPRM-207ENST00000578571 INHBBP09529 407 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 ETV4P43268 484 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 EIF4A1P60842 406 aaKnown RBP6.32□□□□□ -1.4
PTPRM-207ENST00000578571 AMPD3Q01432 767 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 EXOSC9Q06265 439 aaKnown RBP6.32□□□□□ -1.4
PTPRM-207ENST00000578571 SLC39A6Q13433 755 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 NOLC1Q14978 699 aaKnown RBP eCLIP6.32□□□□□ -1.4
PTPRM-207ENST00000578571 ALDH1L2Q3SY69 923 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 PRAMEF9Q5VWM5 478 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 REXO1L1PQ8IX06 675 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 ZDHHC14Q8IZN3 488 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 C7orf31Q8N865 590 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 WDR48Q8TAF3 677 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 TSR2Q969E8 191 aaKnown RBP6.32□□□□□ -1.4
PTPRM-207ENST00000578571 MYL10Q9BUA6 226 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 BARX1Q9HBU1 254 aaPredicted RBP6.32□□□□□ -1.4
PTPRM-207ENST00000578571 DBF4Q9UBU7 674 aaPredicted RBP6.32□□□□□ -1.4
PTPRM-207ENST00000578571 MSRAQ9UJ68 235 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 CCNL1Q9UK58 526 aaPredicted RBP6.32□□□□□ -1.4
PTPRM-207ENST00000578571 FBXO10Q9UK96 956 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 ASAP1Q9ULH1 1129 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 DUSP10Q9Y6W6 482 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 ZNF831Q5JPB2 1677 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 PAPPAQ13219 1627 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 BTAF1O14981 1849 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 SBF2Q86WG5 1849 aa6.32□□□□□ -1.4
PTPRM-207ENST00000578571 A0A0G2JNJ9 132 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 IPO8O15397 1037 aaKnown RBP6.31□□□□□ -1.4
PTPRM-207ENST00000578571 GPR39O43194 453 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 B4GALT3O60512 393 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 PRPF6O94906 941 aaKnown RBP6.31□□□□□ -1.4
PTPRM-207ENST00000578571 KIAA2012Q0VF49 1180 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 EIF4HQ15056 248 aaKnown RBP6.31□□□□□ -1.4
PTPRM-207ENST00000578571 FBLN7Q53RD9 439 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 GRAMD4Q6IC98 578 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 UNQ6494/PRO21346Q6UXR6 183 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 TRMT2AQ8IZ69 625 aaKnown RBP6.31□□□□□ -1.4
PTPRM-207ENST00000578571 CLRN3Q8NCR9 226 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 SMC4Q9NTJ3 1288 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 USP40Q9NVE5 1235 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 MIS18AQ9NYP9 233 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 USP36Q9P275 1121 aaKnown RBP6.31□□□□□ -1.4
PTPRM-207ENST00000578571 Q9UFV3 132 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 CDC42EP3Q9UKI2 254 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 PTPN22Q9Y2R2 807 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 UBR2Q8IWV8 1755 aa6.31□□□□□ -1.4
PTPRM-207ENST00000578571 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.3□□□□□ -1.4
PTPRM-207ENST00000578571 ZNF888P0CJ79 500 aaPredicted RBP6.3□□□□□ -1.4
PTPRM-207ENST00000578571 EIF2S2P20042 333 aaKnown RBP6.3□□□□□ -1.4
PTPRM-207ENST00000578571 HOXA5P20719 270 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 KCNQ1P51787 676 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 ADCY2Q08462 1091 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 ZBTB41Q5SVQ8 909 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 KIAA1841Q6NSI8 718 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 TIGD7Q6NT04 549 aaPredicted RBP6.3□□□□□ -1.4
PTPRM-207ENST00000578571 TTLL10Q6ZVT0 673 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 LARP4Q71RC2 724 aaKnown RBP eCLIP6.3□□□□□ -1.4
PTPRM-207ENST00000578571 OTOP2Q7RTS6 562 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 GPR155Q7Z3F1 870 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 FRMD5Q7Z6J6 570 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 RASSF3Q86WH2 238 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 DDX42Q86XP3 938 aaKnown RBP eCLIP6.3□□□□□ -1.4
PTPRM-207ENST00000578571 KBTBD2Q8IY47 623 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 PITHD1Q9GZP4 211 aaPredicted RBP6.3□□□□□ -1.4
PTPRM-207ENST00000578571 ADAM7Q9H2U9 754 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 HYPKQ9NX55 129 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 RCAN3Q9UKA8 241 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 ZDHHC9Q9Y397 364 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 LAMB4A4D0S4 1761 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 KCPQ6ZWJ8 1503 aa6.3□□□□□ -1.4
PTPRM-207ENST00000578571 PTPRCP08575 1304 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 CICQ96RK0 1608 aaPredicted RBP6.29□□□□□ -1.4
PTPRM-207ENST00000578571 A0A0G2JLL6 359 aaPredicted RBP6.29□□□□□ -1.4
PTPRM-207ENST00000578571 LY75O60449 1722 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 ULK1O75385 1050 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 APOL3O95236 402 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 CPEP16870 476 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 IL6STP40189 918 aaPredicted RBP6.29□□□□□ -1.4
PTPRM-207ENST00000578571 BCAR1P56945 870 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 SESN3P58005 492 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 ANTXR2P58335 489 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 TMPRSS15P98073 1019 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 TXNRD1Q16881 649 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 ZNF827Q17R98 1081 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 TRIM68Q6AZZ1 485 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 KIF6Q6ZMV9 814 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 FRMD7Q6ZUT3 714 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 FAM124AQ86V42 546 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 CXorf67Q86X51 503 aaPredicted RBP6.29□□□□□ -1.4
PTPRM-207ENST00000578571 OR5AN1Q8NGI8 311 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 WDR66Q8TBY9 1149 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 HAPLN2Q9GZV7 340 aa6.29□□□□□ -1.4
PTPRM-207ENST00000578571 CHMP4BQ9H444 224 aaKnown RBP6.29□□□□□ -1.4
PTPRM-207ENST00000578571 VTA1Q9NP79 307 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms