RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 KRT5P13647 590 aa21.83■■□□□ 1.09
CLN5-201ENST00000377453 SETQ01105 290 aaPredicted RBP21.83■■□□□ 1.09
CLN5-201ENST00000377453 SNRNP35Q16560 246 aaKnown RBP21.83■■□□□ 1.09
CLN5-201ENST00000377453 TKFCQ3LXA3 575 aa21.83■■□□□ 1.09
CLN5-201ENST00000377453 KCND2Q9NZV8 630 aa21.83■■□□□ 1.09
CLN5-201ENST00000377453 MTRF1LQ9UGC7 380 aaKnown RBP21.83■■□□□ 1.09
CLN5-201ENST00000377453 ZNF536O15090 1300 aa21.83■■□□□ 1.09
CLN5-201ENST00000377453 HADHBP55084 474 aaKnown RBP21.83■■□□□ 1.08
CLN5-201ENST00000377453 TAX1BP1Q86VP1 789 aa21.83■■□□□ 1.08
CLN5-201ENST00000377453 CCDC197Q8NCU1 140 aa21.83■■□□□ 1.08
CLN5-201ENST00000377453 HELQQ8TDG4 1101 aa21.83■■□□□ 1.08
CLN5-201ENST00000377453 PGM2Q96G03 612 aa21.83■■□□□ 1.08
CLN5-201ENST00000377453 HEMGNQ9BXL5 484 aa21.83■■□□□ 1.08
CLN5-201ENST00000377453 CDC42EP4Q9H3Q1 356 aaKnown RBP21.83■■□□□ 1.08
CLN5-201ENST00000377453 TMEM206Q9H813 350 aa21.83■■□□□ 1.08
CLN5-201ENST00000377453 RAVER2Q9HCJ3 691 aaKnown RBP21.83■■□□□ 1.08
CLN5-201ENST00000377453 ZNF70Q9UC06 446 aaPredicted RBP21.83■■□□□ 1.08
CLN5-201ENST00000377453 KRT17Q04695 432 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 ANKRD42Q8N9B4 389 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 BSNDQ8WZ55 320 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 AGO4Q9HCK5 861 aaKnown RBP21.82■■□□□ 1.08
CLN5-201ENST00000377453 ASTN2O75129 1339 aaPredicted RBP21.82■■□□□ 1.08
CLN5-201ENST00000377453 NPM3O75607 178 aaKnown RBP21.82■■□□□ 1.08
CLN5-201ENST00000377453 DRG2P55039 364 aaKnown RBP21.82■■□□□ 1.08
CLN5-201ENST00000377453 SP4Q02446 784 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 XKR9Q5GH70 373 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 SWT1Q5T5J6 900 aaKnown RBP21.82■■□□□ 1.08
CLN5-201ENST00000377453 EXOC3L1Q86VI1 746 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 CPA5Q8WXQ8 436 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 ART4Q93070 314 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 TAAR1Q96RJ0 339 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 RPS6KC1Q96S38 1066 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 RIT2Q99578 217 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 WNT8AQ9H1J5 351 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 EHMT1Q9H9B1 1298 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 ABCF3Q9NUQ8 709 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 ASIC3Q9UHC3 531 aa21.82■■□□□ 1.08
CLN5-201ENST00000377453 TPX2Q9ULW0 747 aaKnown RBP21.82■■□□□ 1.08
CLN5-201ENST00000377453 R3HDM2Q9Y2K5 976 aaKnown RBP21.82■■□□□ 1.08
CLN5-201ENST00000377453 SPDYE2BA6NHP3 402 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 H0YIN7 160 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 C21orf2O43822 256 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 SPDYE6P0CI01 402 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 GJC1P36383 396 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 CAP2P40123 477 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 QARSP47897 775 aaKnown RBP21.81■■□□□ 1.08
CLN5-201ENST00000377453 E2F5Q15329 346 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 PPP2R5EQ16537 467 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 CEP57Q86XR8 500 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 SHC3Q92529 594 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 AKT1S1Q96B36 256 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.81■■□□□ 1.08
CLN5-201ENST00000377453 ANAPC7Q9UJX3 599 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 CNTNAP1P78357 1384 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 PSPC1Q8WXF1 523 aaKnown RBP21.81■■□□□ 1.08
CLN5-201ENST00000377453 CLEC4DQ8WXI8 215 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 TMOD2Q9NZR1 351 aa21.81■■□□□ 1.08
CLN5-201ENST00000377453 HERC5Q9UII4 1024 aaKnown RBP21.81■■□□□ 1.08
CLN5-201ENST00000377453 CCT8L1PA6NM43 557 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 PODXLO00592 558 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 GJB6O95452 261 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 ECEL1O95672 775 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 CCNE2O96020 404 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 RFX1P22670 979 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 MTMR1Q13613 665 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 SGO2Q562F6 1265 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 GDAP1Q8TB36 358 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 ZNF341Q9BYN7 854 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 ACTR5Q9H9F9 607 aaPredicted RBP21.8■■□□□ 1.08
CLN5-201ENST00000377453 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.8■■□□□ 1.08
CLN5-201ENST00000377453 GH1P01241 217 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 CYP1A2P05177 515 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 CFHP08603 1231 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 CDR1P51861 262 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 RWDD2BP57060 319 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 GTF2BQ00403 316 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 CNGA2Q16280 664 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 SLC39A4Q6P5W5 647 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 PARP9Q8IXQ6 854 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 KCTD17Q8N5Z5 321 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 TBK1Q9UHD2 729 aa21.8■■□□□ 1.08
CLN5-201ENST00000377453 PASKQ96RG2 1323 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 C3orf20Q8ND61 904 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 PARD3BQ8TEW8 1205 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 DDX1Q92499 740 aaKnown RBP21.79■■□□□ 1.08
CLN5-201ENST00000377453 MTUS1Q9ULD2 1270 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 GRIN3BO60391 1043 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 RARGP13631 454 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 PDE6CP51160 858 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 MFAP3P55082 362 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 FKBP1AP62942 108 aaKnown RBP21.79■■□□□ 1.08
CLN5-201ENST00000377453 ADCY2Q08462 1091 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 ZKSCAN8Q15776 578 aaPredicted RBP21.79■■□□□ 1.08
CLN5-201ENST00000377453 KYNUQ16719 465 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 C6orf118Q5T5N4 469 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 PASD1Q8IV76 773 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 POMGNT1Q8WZA1 660 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 AGAP1Q9UPQ3 857 aa21.79■■□□□ 1.08
CLN5-201ENST00000377453 DENND3A2RUS2 1198 aa21.78■■□□□ 1.08
CLN5-201ENST00000377453 AGTP01019 485 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms