RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 PLAGL2Q9UPG8 496 aa25.41■■□□□ 1.66
LSM7-202ENST00000585395 INPP5FQ9Y2H2 1132 aa25.41■■□□□ 1.66
LSM7-202ENST00000585395 GAP43P17677 238 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 MAPK7Q13164 816 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 GIT2Q14161 759 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 CLLU1OSQ5K130 101 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 DAW1Q8N136 415 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 MYCT1Q8N699 235 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 LRRC15Q8TF66 581 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 DDX12PQ92771 950 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 PPP2R3CQ969Q6 453 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 CCDC51Q96ER9 411 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 TRAIPQ9BWF2 469 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 TRIM6Q9C030 488 aaPredicted RBP25.4■■□□□ 1.66
LSM7-202ENST00000585395 KBTBD4Q9NVX7 518 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 HCSTQ9UBK5 93 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 HPSEQ9Y251 543 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 PCDHB2Q9Y5E7 798 aa25.4■■□□□ 1.66
LSM7-202ENST00000585395 C5orf42Q9H799 3197 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 ITGB1P05556 798 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 SLFN14P0C7P3 912 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 LIG1P18858 919 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 IRS1P35568 1242 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 NPTX2P47972 431 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 RNASELQ05823 741 aaKnown RBP25.39■■□□□ 1.66
LSM7-202ENST00000585395 MBTD1Q05BQ5 628 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 ZNF598Q86UK7 904 aaKnown RBP25.39■■□□□ 1.66
LSM7-202ENST00000585395 URGCPQ8TCY9 931 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 BSNDQ8WZ55 320 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 CPB2Q96IY4 423 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 ZNF558Q96NG5 402 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 GBP4Q96PP9 640 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 RNF19AQ9NV58 838 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 SEL1LQ9UBV2 794 aa25.39■■□□□ 1.66
LSM7-202ENST00000585395 NPHP3-ACAD11A0A0J9YXS1 232 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 K7ERI5 159 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 TSPAN1O60635 241 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 ATF7P17544 494 aaPredicted RBP25.38■■□□□ 1.65
LSM7-202ENST00000585395 ZNF131P52739 623 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 FAM187BQ17R55 369 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 TPRNQ4KMQ1 711 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 HERC4Q5GLZ8 1057 aaPredicted RBP25.38■■□□□ 1.65
LSM7-202ENST00000585395 PPP4R3CPQ6ZMV5 832 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 DYMQ7RTS9 669 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 APBB1IPQ7Z5R6 666 aaPredicted RBP25.38■■□□□ 1.65
LSM7-202ENST00000585395 CCDC65Q8IXS2 484 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 HACE1Q8IYU2 909 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 MICAL1Q8TDZ2 1067 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 POF1BQ8WVV4 589 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 RSPH1Q8WYR4 309 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 NTPCRQ9BSD7 190 aaKnown RBP25.38■■□□□ 1.65
LSM7-202ENST00000585395 TMEM134Q9H6X4 195 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 CLDND1Q9NY35 253 aa25.38■■□□□ 1.65
LSM7-202ENST00000585395 MYMKA6NI61 221 aa25.37■■□□□ 1.65
LSM7-202ENST00000585395 MYL1P05976 194 aa25.37■■□□□ 1.65
LSM7-202ENST00000585395 IDEP14735 1019 aa25.37■■□□□ 1.65
LSM7-202ENST00000585395 CACNB1Q02641 598 aaPredicted RBP25.37■■□□□ 1.65
LSM7-202ENST00000585395 STRN3Q13033 797 aa25.37■■□□□ 1.65
LSM7-202ENST00000585395 KANK3Q6NY19 840 aa25.37■■□□□ 1.65
LSM7-202ENST00000585395 TMEM87AQ8NBN3 555 aa25.37■■□□□ 1.65
LSM7-202ENST00000585395 CNNM3Q8NE01 707 aa25.37■■□□□ 1.65
LSM7-202ENST00000585395 CWH43Q9H720 699 aa25.37■■□□□ 1.65
LSM7-202ENST00000585395 POLD4Q9HCU8 107 aa25.37■■□□□ 1.65
LSM7-202ENST00000585395 PLXNA4Q9HCM2 1894 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 SFI1A8K8P3 1242 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 TRAK2O60296 914 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 ZNF623O75123 536 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 FGF18O76093 207 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 PRKCBP05771 671 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 ITGA4P13612 1032 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 PPM1AP35813 382 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 NDUFA8P51970 172 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 PRPF4BQ13523 1007 aaKnown RBP25.36■■□□□ 1.65
LSM7-202ENST00000585395 SMAD2Q15796 467 aaKnown RBP25.36■■□□□ 1.65
LSM7-202ENST00000585395 NOMO2Q5JPE7 1267 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 SPPL3Q8TCT6 385 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 FZD8Q9H461 694 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 RSAD1Q9HA92 442 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 SERTAD1Q9UHV2 236 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 PUF60Q9UHX1 559 aaKnown RBP25.36■■□□□ 1.65
LSM7-202ENST00000585395 MYH11P35749 1972 aa25.36■■□□□ 1.65
LSM7-202ENST00000585395 ACKR2O00590 384 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 ZC3H11AO75152 810 aaKnown RBP eCLIP25.35■■□□□ 1.652e-9■□□□□ 8.9
LSM7-202ENST00000585395 MAPTP10636 758 aaKnown RBP25.35■■□□□ 1.65
LSM7-202ENST00000585395 HOXA11P31270 313 aaPredicted RBP25.35■■□□□ 1.65
LSM7-202ENST00000585395 LTBRP36941 435 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 ALDH7A1P49419 539 aaKnown RBP25.35■■□□□ 1.65
LSM7-202ENST00000585395 ASIC1P78348 528 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 KRT17Q04695 432 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 UBE3AQ05086 875 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 CNNM4Q6P4Q7 775 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 KCNT2Q6UVM3 1135 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 C7orf25Q9BPX7 421 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 APOL6Q9BWW8 343 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 TRIM9Q9C026 710 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 GBP3Q9H0R5 595 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 ARHGAP28Q9P2N2 729 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 HOOK1Q9UJC3 728 aaKnown RBP25.35■■□□□ 1.65
LSM7-202ENST00000585395 USP34Q70CQ2 3546 aa25.35■■□□□ 1.65
LSM7-202ENST00000585395 CNTNAP2Q9UHC6 1331 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms