RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 LIG4P49917 911 aa19.42■□□□□ 0.7
C6orf48-204ENST00000375639 MORC3Q14149 939 aa19.42■□□□□ 0.7
C6orf48-204ENST00000375639 DSC3Q14574 896 aa19.42■□□□□ 0.7
C6orf48-204ENST00000375639 ATF7IP2Q5U623 682 aa19.42■□□□□ 0.7
C6orf48-204ENST00000375639 GPR153Q6NV75 609 aa19.42■□□□□ 0.7
C6orf48-204ENST00000375639 PSRC1Q6PGN9 363 aaPredicted RBP19.42■□□□□ 0.7
C6orf48-204ENST00000375639 OTOP2Q7RTS6 562 aa19.42■□□□□ 0.7
C6orf48-204ENST00000375639 MYOCDQ8IZQ8 938 aa19.42■□□□□ 0.7
C6orf48-204ENST00000375639 ACO2Q99798 780 aaKnown RBP19.42■□□□□ 0.7
C6orf48-204ENST00000375639 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.42■□□□□ 0.75e-24■□□□□ 9
C6orf48-204ENST00000375639 TCHPQ9BT92 498 aa19.42■□□□□ 0.7
C6orf48-204ENST00000375639 GTPBP4Q9BZE4 634 aaKnown RBP19.42■□□□□ 0.7
C6orf48-204ENST00000375639 TMEM206Q9H813 350 aa19.42■□□□□ 0.7
C6orf48-204ENST00000375639 A0A1B0GUA9 196 aa19.41■□□□□ 0.7
C6orf48-204ENST00000375639 ABHD14A-ACY1A0A1B0GW23 586 aa19.41■□□□□ 0.7
C6orf48-204ENST00000375639 ENPP3O14638 875 aa19.41■□□□□ 0.7
C6orf48-204ENST00000375639 HNRNPDLO14979 420 aaKnown RBP19.41■□□□□ 0.7
C6orf48-204ENST00000375639 N4BP3O15049 544 aa19.41■□□□□ 0.7
C6orf48-204ENST00000375639 KIF20AO95235 890 aa19.41■□□□□ 0.7
C6orf48-204ENST00000375639 MATR3P43243 847 aaKnown RBP eCLIP19.41■□□□□ 0.7
C6orf48-204ENST00000375639 TMEM240Q5SV17 173 aa19.41■□□□□ 0.7
C6orf48-204ENST00000375639 EEF1DP3Q658K8 133 aa19.41■□□□□ 0.7
C6orf48-204ENST00000375639 ZPBP2Q6X784 338 aa19.41■□□□□ 0.7
C6orf48-204ENST00000375639 RTN4RL1Q86UN2 441 aaPredicted RBP19.41■□□□□ 0.7
C6orf48-204ENST00000375639 TRIML1Q8N9V2 468 aa19.41■□□□□ 0.7
C6orf48-204ENST00000375639 COL25A1Q9BXS0 654 aaPredicted RBP19.41■□□□□ 0.7
C6orf48-204ENST00000375639 IKZF4Q9H2S9 585 aa19.41■□□□□ 0.7
C6orf48-204ENST00000375639 TNFSF13BQ9Y275 285 aa19.41■□□□□ 0.7
C6orf48-204ENST00000375639 UBE4BO95155 1302 aa19.41■□□□□ 0.7
C6orf48-204ENST00000375639 ZBBXA8MT70 800 aa19.4■□□□□ 0.7
C6orf48-204ENST00000375639 HOXD13P35453 343 aa19.4■□□□□ 0.7
C6orf48-204ENST00000375639 BMT2Q1RMZ1 405 aa19.4■□□□□ 0.7
C6orf48-204ENST00000375639 RBM43Q6ZSC3 357 aaKnown RBP19.4■□□□□ 0.7
C6orf48-204ENST00000375639 FAM43BQ6ZT52 329 aaPredicted RBP19.4■□□□□ 0.7
C6orf48-204ENST00000375639 LINC01599Q8WXQ3 324 aa19.4■□□□□ 0.7
C6orf48-204ENST00000375639 CCDC51Q96ER9 411 aa19.4■□□□□ 0.7
C6orf48-204ENST00000375639 ZBTB45Q96K62 511 aaPredicted RBP19.4■□□□□ 0.7
C6orf48-204ENST00000375639 ADPGKQ9BRR6 497 aa19.4■□□□□ 0.7
C6orf48-204ENST00000375639 UBE2OQ9C0C9 1292 aaKnown RBP19.4■□□□□ 0.7
C6orf48-204ENST00000375639 TSPYL2Q9H2G4 693 aaPredicted RBP19.4■□□□□ 0.7
C6orf48-204ENST00000375639 PDZD7Q9H5P4 517 aa19.4■□□□□ 0.7
C6orf48-204ENST00000375639 RGS18Q9NS28 235 aa19.4■□□□□ 0.7
C6orf48-204ENST00000375639 ANKFY1Q9P2R3 1169 aa19.4■□□□□ 0.7
C6orf48-204ENST00000375639 STXBP5LQ9Y2K9 1186 aa19.4■□□□□ 0.7
C6orf48-204ENST00000375639 UNC80Q8N2C7 3258 aa19.4■□□□□ 0.7
C6orf48-204ENST00000375639 ANKRD63C9JTQ0 380 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 EFCAB14O75071 495 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 TOM1L1O75674 476 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 BAIAP3O94812 1187 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 NPTXRO95502 500 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 PIGRP01833 764 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 BMP6P22004 513 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 PRCPP42785 496 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 KNOP1Q1ED39 458 aaKnown RBP19.39■□□□□ 0.69
C6orf48-204ENST00000375639 ZNF568Q3ZCX4 644 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 SLC27A1Q6PCB7 646 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 ZBTB33Q86T24 672 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 GUF1Q8N442 669 aaKnown RBP19.39■□□□□ 0.69
C6orf48-204ENST00000375639 DEFB123Q8N688 67 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 GDF15Q99988 308 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 TRIM6Q9C030 488 aaPredicted RBP19.39■□□□□ 0.69
C6orf48-204ENST00000375639 GBP3Q9H0R5 595 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 C1orf112Q9NSG2 853 aa19.39■□□□□ 0.69
C6orf48-204ENST00000375639 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.38■□□□□ 0.69
C6orf48-204ENST00000375639 TISP43B9A030 160 aa19.38■□□□□ 0.69
C6orf48-204ENST00000375639 CLDN3O15551 220 aa19.38■□□□□ 0.69
C6orf48-204ENST00000375639 HARSP12081 509 aaKnown RBP19.38■□□□□ 0.69
C6orf48-204ENST00000375639 KCNJ6P48051 423 aa19.38■□□□□ 0.69
C6orf48-204ENST00000375639 STIM1Q13586 685 aa19.38■□□□□ 0.69
C6orf48-204ENST00000375639 UBXN11Q5T124 520 aa19.38■□□□□ 0.69
C6orf48-204ENST00000375639 SLC39A4Q6P5W5 647 aa19.38■□□□□ 0.69
C6orf48-204ENST00000375639 SASS6Q6UVJ0 657 aa19.38■□□□□ 0.69
C6orf48-204ENST00000375639 MPZL3Q6UWV2 235 aa19.38■□□□□ 0.69
C6orf48-204ENST00000375639 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.38■□□□□ 0.69
C6orf48-204ENST00000375639 SLC24A5Q71RS6 500 aa19.38■□□□□ 0.69
C6orf48-204ENST00000375639 APBB1IPQ7Z5R6 666 aaPredicted RBP19.38■□□□□ 0.69
C6orf48-204ENST00000375639 EIF2AQ9BY44 585 aaKnown RBP19.38■□□□□ 0.69
C6orf48-204ENST00000375639 PTPRHQ9HD43 1115 aa19.38■□□□□ 0.69
C6orf48-204ENST00000375639 FAM105AQ9NUU6 356 aa19.38■□□□□ 0.69
C6orf48-204ENST00000375639 ZMYM2Q9UBW7 1377 aa19.37■□□□□ 0.69
C6orf48-204ENST00000375639 C9IYK1 514 aa19.37■□□□□ 0.69
C6orf48-204ENST00000375639 NLRP12P59046 1061 aa19.37■□□□□ 0.69
C6orf48-204ENST00000375639 SLFN12LQ6IEE8 588 aa19.37■□□□□ 0.69
C6orf48-204ENST00000375639 HS2ST1Q7LGA3 356 aa19.37■□□□□ 0.69
C6orf48-204ENST00000375639 ADSSL1Q8N142 457 aa19.37■□□□□ 0.69
C6orf48-204ENST00000375639 HERVK_113Q902F9 699 aa19.37■□□□□ 0.69
C6orf48-204ENST00000375639 CDT1Q9H211 546 aa19.37■□□□□ 0.69
C6orf48-204ENST00000375639 MTIF3Q9H2K0 278 aaKnown RBP19.37■□□□□ 0.69
C6orf48-204ENST00000375639 PCDHB2Q9Y5E7 798 aa19.37■□□□□ 0.69
C6orf48-204ENST00000375639 A0A0U1RQF3 1178 aa19.36■□□□□ 0.69
C6orf48-204ENST00000375639 TGFB1I1O43294 461 aa19.36■□□□□ 0.69
C6orf48-204ENST00000375639 LETM1O95202 739 aaPredicted RBP19.36■□□□□ 0.69
C6orf48-204ENST00000375639 AMHP03971 560 aa19.36■□□□□ 0.69
C6orf48-204ENST00000375639 SKIP12755 728 aa19.36■□□□□ 0.69
C6orf48-204ENST00000375639 CD44P16070 742 aaKnown RBP19.36■□□□□ 0.69
C6orf48-204ENST00000375639 PROZP22891 400 aa19.36■□□□□ 0.69
C6orf48-204ENST00000375639 PPP1R2P41236 205 aa19.36■□□□□ 0.69
C6orf48-204ENST00000375639 RAB27AP51159 221 aa19.36■□□□□ 0.69
C6orf48-204ENST00000375639 WDR5P61964 334 aaKnown RBP19.36■□□□□ 0.69
C6orf48-204ENST00000375639 SHHQ15465 462 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms