RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 KSR1Q8IVT5 923 aa25.56■■□□□ 1.68
LSM7-202ENST00000585395 CMTR2Q8IYT2 770 aaKnown RBP25.56■■□□□ 1.68
LSM7-202ENST00000585395 SYT2Q8N9I0 419 aaPredicted RBP25.56■■□□□ 1.68
LSM7-202ENST00000585395 PCDHA7Q9UN72 937 aa25.56■■□□□ 1.68
LSM7-202ENST00000585395 SRGAP2CP0DJJ0 459 aa25.55■■□□□ 1.68
LSM7-202ENST00000585395 GPM6BQ13491 265 aa25.55■■□□□ 1.68
LSM7-202ENST00000585395 PTPROQ16827 1216 aa25.55■■□□□ 1.68
LSM7-202ENST00000585395 RNF169Q8NCN4 708 aa25.55■■□□□ 1.68
LSM7-202ENST00000585395 PRPF31Q8WWY3 499 aaKnown RBP25.55■■□□□ 1.68
LSM7-202ENST00000585395 KIFAP3Q92845 792 aa25.55■■□□□ 1.68
LSM7-202ENST00000585395 FBXL18Q96ME1 805 aa25.55■■□□□ 1.68
LSM7-202ENST00000585395 DACT1Q9NYF0 836 aa25.55■■□□□ 1.68
LSM7-202ENST00000585395 KCNG1Q9UIX4 513 aa25.55■■□□□ 1.68
LSM7-202ENST00000585395 C9IYK1 514 aa25.54■■□□□ 1.68
LSM7-202ENST00000585395 STAT6P42226 847 aa25.54■■□□□ 1.68
LSM7-202ENST00000585395 PPP2R5AQ15172 486 aa25.54■■□□□ 1.68
LSM7-202ENST00000585395 FAM102BQ5T8I3 360 aa25.54■■□□□ 1.68
LSM7-202ENST00000585395 LARP4BQ92615 738 aaKnown RBP25.54■■□□□ 1.68
LSM7-202ENST00000585395 RAD54LQ92698 747 aa25.54■■□□□ 1.68
LSM7-202ENST00000585395 ZNF689Q96CS4 500 aaPredicted RBP25.54■■□□□ 1.68
LSM7-202ENST00000585395 SNX27Q96L92 541 aa25.54■■□□□ 1.68
LSM7-202ENST00000585395 IFT74Q96LB3 600 aa25.54■■□□□ 1.68
LSM7-202ENST00000585395 DRC1Q96MC2 740 aa25.54■■□□□ 1.68
LSM7-202ENST00000585395 POLR3FQ9H1D9 316 aaPredicted RBP25.54■■□□□ 1.68
LSM7-202ENST00000585395 XPNPEP1Q9NQW7 623 aa25.54■■□□□ 1.68
LSM7-202ENST00000585395 GOLGA6L4A6NEF3 574 aa25.53■■□□□ 1.68
LSM7-202ENST00000585395 TBKBP1A7MCY6 615 aa25.53■■□□□ 1.68
LSM7-202ENST00000585395 PHKA2P46019 1235 aa25.53■■□□□ 1.68
LSM7-202ENST00000585395 GATMP50440 423 aa25.53■■□□□ 1.68
LSM7-202ENST00000585395 LAMTOR4Q0VGL1 99 aa25.53■■□□□ 1.68
LSM7-202ENST00000585395 AXDND1Q5T1B0 1012 aaPredicted RBP25.53■■□□□ 1.68
LSM7-202ENST00000585395 ADALQ6DHV7 355 aa25.53■■□□□ 1.68
LSM7-202ENST00000585395 TWF2Q6IBS0 349 aaKnown RBP25.53■■□□□ 1.68
LSM7-202ENST00000585395 USP49Q70CQ1 688 aa25.53■■□□□ 1.68
LSM7-202ENST00000585395 ABI1Q8IZP0 508 aa25.53■■□□□ 1.68
LSM7-202ENST00000585395 MRPL38Q96DV4 380 aaKnown RBP25.53■■□□□ 1.68
LSM7-202ENST00000585395 LRRC27Q9C0I9 530 aa25.53■■□□□ 1.68
LSM7-202ENST00000585395 CUEDC2Q9H467 287 aa25.53■■□□□ 1.68
LSM7-202ENST00000585395 TMEM161AQ9NX61 479 aa25.53■■□□□ 1.68
LSM7-202ENST00000585395 PIN4Q9Y237 131 aaKnown RBP25.53■■□□□ 1.68
LSM7-202ENST00000585395 FAM50BQ9Y247 325 aa25.53■■□□□ 1.68
LSM7-202ENST00000585395 HOXA2O43364 376 aa25.52■■□□□ 1.68
LSM7-202ENST00000585395 KRT18P05783 430 aaKnown RBP25.52■■□□□ 1.68
LSM7-202ENST00000585395 ARL2P36404 184 aa25.52■■□□□ 1.68
LSM7-202ENST00000585395 POU5F1BQ06416 359 aa25.52■■□□□ 1.68
LSM7-202ENST00000585395 DSC3Q14574 896 aa25.52■■□□□ 1.68
LSM7-202ENST00000585395 RINT1Q6NUQ1 792 aa25.52■■□□□ 1.68
LSM7-202ENST00000585395 KCNK18Q7Z418 384 aa25.52■■□□□ 1.68
LSM7-202ENST00000585395 IQUBQ8NA54 791 aa25.52■■□□□ 1.68
LSM7-202ENST00000585395 RNF149Q8NC42 400 aa25.52■■□□□ 1.68
LSM7-202ENST00000585395 C11orf84Q9BUA3 381 aaPredicted RBP25.52■■□□□ 1.68
LSM7-202ENST00000585395 RC3H2Q9HBD1 1191 aaKnown RBP25.52■■□□□ 1.68
LSM7-202ENST00000585395 PRKAG3Q9UGI9 489 aa25.52■■□□□ 1.68
LSM7-202ENST00000585395 GUCY2CP25092 1073 aa25.51■■□□□ 1.67
LSM7-202ENST00000585395 BMPR1AP36894 532 aa25.51■■□□□ 1.67
LSM7-202ENST00000585395 PCBP1Q15365 356 aaKnown RBP eCLIP25.51■■□□□ 1.67
LSM7-202ENST00000585395 RESP18Q5W5W9 173 aa25.51■■□□□ 1.67
LSM7-202ENST00000585395 SHC4Q6S5L8 630 aa25.51■■□□□ 1.67
LSM7-202ENST00000585395 SV2BQ7L1I2 683 aa25.51■■□□□ 1.67
LSM7-202ENST00000585395 MAEAQ7L5Y9 396 aa25.51■■□□□ 1.67
LSM7-202ENST00000585395 SRGAP1Q7Z6B7 1085 aa25.51■■□□□ 1.67
LSM7-202ENST00000585395 ELAC1Q9H777 363 aaKnown RBP25.51■■□□□ 1.67
LSM7-202ENST00000585395 C17orf75Q9HAS0 396 aa25.51■■□□□ 1.67
LSM7-202ENST00000585395 CHST12Q9NRB3 414 aa25.51■■□□□ 1.67
LSM7-202ENST00000585395 MRPL42Q9Y6G3 142 aaKnown RBP25.51■■□□□ 1.67
LSM7-202ENST00000585395 H3BNC9 293 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 TRIOO75962 3097 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 ERLIN2O94905 339 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 RB1P06400 928 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 CMA1P23946 247 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 SLC12A3P55017 1021 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 TIGD5Q53EQ6 642 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 C1orf186Q6ZWK4 172 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 GPBP1Q86WP2 473 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 ZBTB8OSQ8IWT0 167 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 C2orf40Q9H1Z8 148 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 MAGEF1Q9HAY2 307 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 BLOC1S4Q9NUP1 217 aa25.5■■□□□ 1.67
LSM7-202ENST00000585395 FNDC1Q4ZHG4 1894 aaPredicted RBP25.49■■□□□ 1.67
LSM7-202ENST00000585395 PHLPP2Q6ZVD8 1323 aa25.49■■□□□ 1.67
LSM7-202ENST00000585395 FGFR1P11362 822 aa25.49■■□□□ 1.67
LSM7-202ENST00000585395 NCBP1Q09161 790 aaKnown RBP25.49■■□□□ 1.67
LSM7-202ENST00000585395 DHX8Q14562 1220 aaKnown RBP25.49■■□□□ 1.67
LSM7-202ENST00000585395 ECHDC2Q86YB7 292 aa25.49■■□□□ 1.67
LSM7-202ENST00000585395 PDILTQ8N807 584 aa25.49■■□□□ 1.67
LSM7-202ENST00000585395 AAASQ9NRG9 546 aa25.49■■□□□ 1.67
LSM7-202ENST00000585395 ODF2LQ9ULJ1 636 aa25.49■■□□□ 1.67
LSM7-202ENST00000585395 KIAA1671Q9BY89 1806 aa25.49■■□□□ 1.67
LSM7-202ENST00000585395 ZNF318Q5VUA4 2279 aa25.48■■□□□ 1.67
LSM7-202ENST00000585395 A0A1W2PQ27 194 aa25.48■■□□□ 1.67
LSM7-202ENST00000585395 A0A1W2PQ64 194 aa25.48■■□□□ 1.67
LSM7-202ENST00000585395 A0A1W2PQD8 194 aa25.48■■□□□ 1.67
LSM7-202ENST00000585395 H3BQ06 376 aaPredicted RBP25.48■■□□□ 1.67
LSM7-202ENST00000585395 CSPG5O95196 566 aa25.48■■□□□ 1.67
LSM7-202ENST00000585395 SKIP12755 728 aa25.48■■□□□ 1.67
LSM7-202ENST00000585395 GLRA2P23416 452 aa25.48■■□□□ 1.67
LSM7-202ENST00000585395 NAMPTP43490 491 aa25.48■■□□□ 1.67
LSM7-202ENST00000585395 AMPD3Q01432 767 aa25.48■■□□□ 1.67
LSM7-202ENST00000585395 ZP2Q05996 745 aa25.48■■□□□ 1.67
LSM7-202ENST00000585395 MCM6Q14566 821 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms