RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 ZNF587Q96SQ5 575 aaPredicted RBP6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 FTOQ9C0B1 505 aaKnown RBP eCLIP6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 MAF1Q9H063 256 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 TTYH1Q9H313 450 aaPredicted RBP6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 ACAD9Q9H845 621 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 SLC28A3Q9HAS3 691 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 SLC38A10Q9HBR0 1119 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 HOMER2Q9NSB8 354 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 PLXNA1Q9UIW2 1896 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 PCDHA7Q9UN72 937 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 MRPL11Q9Y3B7 192 aaKnown RBP6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 STARD13Q9Y3M8 1113 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 COL11A1P12107 1806 aaPredicted RBP6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 DNAJC25-GNG10A0A024R161 153 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 A0A1W2PQ27 194 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 A0A1W2PQ64 194 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 A0A1W2PQD8 194 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 SFI1A8K8P3 1242 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 B4DLN1 442 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 MEIS2O14770 477 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 SNAI1O95863 264 aaPredicted RBP6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 SUPT20HL2P0C7V6 817 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 CSF2RAP15509 400 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 IGFBP4P22692 258 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 CMA1P23946 247 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 ITGB8P26012 769 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 ME1P48163 572 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 USP11P51784 963 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 SPEM2Q0P670 501 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 ORC2Q13416 577 aaPredicted RBP6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 NONOQ15233 471 aaKnown RBP eCLIP6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 USH1GQ495M9 461 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 TTC38Q5R3I4 469 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 AXDND1Q5T1B0 1012 aaPredicted RBP6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 IQSEC1Q6DN90 963 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 ARMCX2Q7L311 632 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 REPS2Q8NFH8 660 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 RASGRP4Q8TDF6 673 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 ATXN2LQ8WWM7 1075 aaKnown RBP6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 CEP63Q96MT8 703 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 PPP1R12CQ9BZL4 782 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 PHACTR1Q9C0D0 580 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 HIPK3Q9H422 1215 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 MAP3K20Q9NYL2 800 aaKnown RBP6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 PCDHB6Q9Y5E3 794 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 GPC6Q9Y625 555 aaPredicted RBP6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 PARP14Q460N5 1801 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 ZNF536O15090 1300 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 ABCB11O95342 1321 aa6.96□□□□□ -1.3
DEPDC4-209ENST00000550587 LAD1O00515 517 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 OPLAHO14841 1288 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 DYNC1LI2O43237 492 aaPredicted RBP6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 CUTAO60888 179 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 ALBP02768 609 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 ACTN1P12814 892 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 ALAS1P13196 640 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 ATP2B1P20020 1258 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 MARCKSP29966 332 aaPredicted RBP6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 CDK7P50613 346 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 ATP1A2P50993 1020 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 PSMA6P60900 246 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 MRPS5P82675 430 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 GHRHRQ02643 423 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 AP3B2Q13367 1082 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 ITGA7Q13683 1181 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 ZNF174Q15697 407 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 INF2Q27J81 1249 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 AAK1Q2M2I8 961 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 TMEM240Q5SV17 173 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 JAKMIP3Q5VZ66 844 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 ARL6IP4Q66PJ3 421 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 USP17L6PQ6QN14 398 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 ZNF365Q70YC5 407 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 NEK8Q86SG6 692 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 MCF2L2Q86YR7 1114 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 C4orf32Q8N8J7 132 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 TBCKQ8TEA7 893 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 LENG1Q96BZ8 264 aaPredicted RBP6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 UPF3AQ9H1J1 476 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 IL23AQ9NPF7 189 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 BRD7Q9NPI1 651 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 ADD3Q9UEY8 706 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 TBX21Q9UL17 535 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 CCPG1Q9ULG6 757 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 Q9Y3F1 56 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 RIPK3Q9Y572 518 aa6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 SRPRBQ9Y5M8 271 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-209ENST00000550587 CYP3A7-CYP3A51PA0A087WV96 503 aa6.94□□□□□ -1.3
DEPDC4-209ENST00000550587 FAM237AA0A1B0GTK4 181 aa6.94□□□□□ -1.3
DEPDC4-209ENST00000550587 GCOM1H8Y6P7 765 aaPredicted RBP6.94□□□□□ -1.3
DEPDC4-209ENST00000550587 EDIL3O43854 480 aa6.94□□□□□ -1.3
DEPDC4-209ENST00000550587 PFKMP08237 780 aa6.94□□□□□ -1.3
DEPDC4-209ENST00000550587 CYP3A4P08684 503 aa6.94□□□□□ -1.3
DEPDC4-209ENST00000550587 POLR2MP0CAP2 368 aa6.94□□□□□ -1.3
DEPDC4-209ENST00000550587 ACRP10323 421 aa6.94□□□□□ -1.3
DEPDC4-209ENST00000550587 GCFC2P16383 781 aaKnown RBP6.94□□□□□ -1.3
DEPDC4-209ENST00000550587 CYP3A7P24462 503 aa6.94□□□□□ -1.3
DEPDC4-209ENST00000550587 MCM7P33993 719 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms