RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 UBE2HP62256 183 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 ACVR2BQ13705 512 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 SLC39A14Q15043 492 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 CDC37Q16543 378 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 MCTP2Q6DN12 878 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 MFSD5Q6N075 450 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 PSRC1Q6PGN9 363 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 MAMDC4Q6UXC1 1216 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 C8orf86Q6ZUL3 223 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 RAB44Q7Z6P3 723 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 FBXO11Q86XK2 927 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 LINC00301Q8NCQ3 95 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 ANP32EQ9BTT0 268 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 SEZ6LQ9BYH1 1024 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 AP5M1Q9H0R1 490 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 TSPAN10Q9H1Z9 355 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 RANBP17Q9H2T7 1088 aaKnown RBP6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 ZNF576Q9H609 170 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 PSTPIP2Q9H939 334 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 FBXO28Q9NVF7 368 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 MSRAQ9UJ68 235 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 PNMA2Q9UL42 364 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 ZNF214Q9UL59 606 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 PCDHA6Q9UN73 950 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 HCN4Q9Y3Q4 1203 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 PCDHA8Q9Y5H6 950 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 CLIC4Q9Y696 253 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 MORC2Q9Y6X9 1032 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 CCDC194A0A1B0GVG4 234 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 GOLGA6L4A6NEF3 574 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 ASB14A6NK59 587 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 ATP2A1O14983 1001 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 SPTLC2O15270 562 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 FIBPO43427 364 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 PPP6R2O75170 966 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 SIN3BO75182 1162 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 GADD45BO75293 160 aaPredicted RBP6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 CABYRO75952 493 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 BMP15O95972 392 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 MBD3O95983 291 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 ASGR1P07306 291 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 SPATA31C1P0DKV0 1188 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 PRKCSHP14314 528 aaPredicted RBP6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 GATA4P43694 442 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 ADCY7P51828 1080 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 OAZ1P54368 228 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 CLDN10P78369 228 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 CEBPZQ03701 1054 aaKnown RBP6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 FAAP100Q0VG06 881 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 STK38Q15208 465 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 PTPAQ15257 358 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 SF3A1Q15459 793 aaKnown RBP6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 KLHL40Q2TBA0 621 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 ADALQ6DHV7 355 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 KRT25Q7Z3Z0 450 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 RPUSD2Q8IZ73 545 aaKnown RBP6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 REXO1Q8N1G1 1221 aaKnown RBP6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 KCNG4Q8TDN1 519 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 CUL5Q93034 780 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 TIFAQ96CG3 184 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 HSH2DQ96JZ2 352 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 MPHOSPH6Q99547 160 aaKnown RBP6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 RAVER2Q9HCJ3 691 aaKnown RBP6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 NOL7Q9UMY1 257 aaKnown RBP6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 CEP131Q9UPN4 1083 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 DDX49Q9Y6V7 483 aaKnown RBP6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 SYNRGQ9UMZ2 1314 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 SMCHD1A6NHR9 2005 aa6.98□□□□□ -1.29
DEPDC4-209ENST00000550587 LTBP2Q14767 1821 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 A0A0G2JMZ2 1700 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 ADARB2-AS1A8MUL3 147 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 FAM229AH3BQW9 127 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 M0R082 166 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 ARVCFO00192 962 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 ADAMTS3O15072 1205 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 ADAMTS4O75173 837 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 FOSP01100 380 aaPredicted RBP6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 FGBP02675 491 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 ICAM1P05362 532 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 TAL1P17542 331 aaPredicted RBP6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 CST5P28325 142 aaPredicted RBP6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 GJA9P57773 515 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 SNAP25P60880 206 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 TNFAIP2Q03169 654 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 RAB30Q15771 203 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 TKFCQ3LXA3 575 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 CCDC144BQ3MJ40 725 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 BRDTQ58F21 947 aaPredicted RBP6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 EARS2Q5JPH6 523 aaKnown RBP6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 PIK3AP1Q6ZUJ8 805 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 TRIM50Q86XT4 487 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 SAMD3Q8N6K7 520 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 KLHDC9Q8NEP7 349 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 ZNF417Q8TAU3 575 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 GPT2Q8TD30 523 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 PPM1EQ8WY54 764 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 PGBD1Q96JS3 809 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 SNX27Q96L92 541 aa6.97□□□□□ -1.29
DEPDC4-209ENST00000550587 UCN2Q96RP3 112 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms