RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 FEM1BQ9UK73 627 aa7.02□□□□□ -1.29
DEPDC4-209ENST00000550587 RCOR1Q9UKL0 485 aa7.02□□□□□ -1.29
DEPDC4-209ENST00000550587 KCNJ14Q9UNX9 436 aa7.02□□□□□ -1.29
DEPDC4-209ENST00000550587 KIAA1024Q9UPX6 916 aa7.02□□□□□ -1.29
DEPDC4-209ENST00000550587 ELP1O95163 1332 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 ZNF236Q9UL36 1845 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 UNC80Q8N2C7 3258 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 A0A1W2PQ45 241 aaPredicted RBP7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 A0A1W2PQY0 241 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 ESYT2A0FGR8 921 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 POM121CA8CG34 1229 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 KIF28PB7ZC32 967 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 STXBP3O00186 592 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 PRPF40AO75400 957 aaKnown RBP7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 PGK1P00558 417 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 PGK2P07205 417 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 ITGB7P26010 798 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 GNA11P29992 359 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 KRT2P35908 639 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 SLC16A2P36021 539 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 STAT2P52630 851 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 NLRP5P59047 1200 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 PPIGQ13427 754 aaKnown RBP eCLIP7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 NPY5RQ15761 445 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 FAM83BQ5T0W9 1011 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 SYDE2Q5VT97 1194 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 WWC2Q6AWC2 1192 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 SNRNP48Q6IEG0 339 aaKnown RBP7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 FAM173BQ6P4H8 233 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 HEATR3Q7Z4Q2 680 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 FAM160B2Q86V87 743 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 TEX2Q8IWB9 1127 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 BLIDQ8IZY5 108 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 Q8N3U1 123 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 TMEM199Q8N511 208 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 DAGLBQ8NCG7 672 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 BICD2Q8TD16 824 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 TNFRSF25Q93038 417 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 CHAMP1Q96JM3 812 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 NUP88Q99567 741 aaPredicted RBP7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 SLC30A3Q99726 388 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 SLF1Q9BQI6 1058 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 GLT8D2Q9H1C3 349 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 ABHD16BQ9H3Z7 469 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 C6orf50Q9HD87 102 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 NEUROD4Q9HD90 331 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 RTEL1Q9NZ71 1219 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 ZHX1Q9UKY1 873 aaPredicted RBP7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 PPP1R9AQ9ULJ8 1098 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 ISY1Q9ULR0 285 aaKnown RBP7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 PCDHA4Q9UN74 947 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 ADAMTS5Q9UNA0 930 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 MYH15Q9Y2K3 1946 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
DEPDC4-209ENST00000550587 RANBP2P49792 3224 aaKnown RBP7□□□□□ -1.29
DEPDC4-209ENST00000550587 ZNFX1Q9P2E3 1918 aaKnown RBP7□□□□□ -1.29
DEPDC4-209ENST00000550587 SERTM1A2A2V5 107 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 TRIM43BA6NCK2 446 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 SMCO2A6NFE2 343 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 M0R2N6 131 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 KIAA0355O15063 1070 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 ZEB2O60315 1214 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 DUSP11O75319 330 aaKnown RBP7□□□□□ -1.29
DEPDC4-209ENST00000550587 TIMP1P01033 207 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 IGHA2P01877 340 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 C6orf222P0C671 652 aaPredicted RBP7□□□□□ -1.29
DEPDC4-209ENST00000550587 NCLP19338 710 aaKnown RBP7□□□□□ -1.29
DEPDC4-209ENST00000550587 MRPL12P52815 198 aaKnown RBP7□□□□□ -1.29
DEPDC4-209ENST00000550587 ACLYP53396 1101 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 NAPAP54920 295 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 IKQ13123 557 aaPredicted RBP7□□□□□ -1.29
DEPDC4-209ENST00000550587 KCNA10Q16322 511 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 QRICH1Q2TAL8 776 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 ZNF792Q3KQV3 632 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 RILPL1Q5EBL4 403 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 C9orf50Q5SZB4 431 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 ANKRD33Q7Z3H0 272 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 HOMER1Q86YM7 354 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 CPXCR1Q8N123 301 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 CHST13Q8NET6 341 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 TPCN2Q8NHX9 752 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 ADAMTS19Q8TE59 1207 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 LEO1Q8WVC0 666 aaPredicted RBP7□□□□□ -1.29
DEPDC4-209ENST00000550587 MYLIPQ8WY64 445 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 TRIM43Q96BQ3 446 aaPredicted RBP7□□□□□ -1.29
DEPDC4-209ENST00000550587 SPATA32Q96LK8 384 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 USP28Q96RU2 1077 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 MDFIQ99750 246 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 AMNQ9BXJ7 453 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 RIC8AQ9NPQ8 531 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 PCDHA1Q9Y5I3 950 aa7□□□□□ -1.29
DEPDC4-209ENST00000550587 RLFQ13129 1914 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 A0A0U1RQG5 324 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 PPP1R11O60927 126 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 YEATS4O95619 227 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 ZNF865P0CJ78 1059 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 ALAS2P22557 587 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 TRAPPC10P48553 1259 aa6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 NASPP49321 788 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-209ENST00000550587 TOB1P50616 345 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms