RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 ZNF804BA4D1E1 1349 aa7.22□□□□□ -1.25
ITGA6-211ENST00000497107 ELP1O95163 1332 aa7.22□□□□□ -1.25
ITGA6-211ENST00000497107 PNPLA7Q6ZV29 1317 aa7.22□□□□□ -1.25
ITGA6-211ENST00000497107 KLF18A0A0U1RQI7 1052 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 SYCE3A1L190 88 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 GOLGA6L4A6NEF3 574 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 DTNBO60941 627 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 GYG1P46976 350 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 NASPP49321 788 aaPredicted RBP7.21□□□□□ -1.26
ITGA6-211ENST00000497107 CCDC183Q5T5S1 534 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 LDLRAD1Q5T700 205 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 ATL3Q6DD88 541 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 TMED8Q6PL24 325 aaPredicted RBP7.21□□□□□ -1.26
ITGA6-211ENST00000497107 CPLX2Q6PUV4 134 aaKnown RBP7.21□□□□□ -1.26
ITGA6-211ENST00000497107 FAM196AQ6ZSG2 479 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 CHST3Q7LGC8 479 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 CELF1Q92879 486 aaKnown RBP7.21□□□□□ -1.26
ITGA6-211ENST00000497107 PANK2Q9BZ23 570 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 KRT23Q9C075 422 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 SEMA6CQ9H3T2 930 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 TSPY26PQ9H489 355 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 ARMT1Q9H993 441 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 DISC1Q9NRI5 854 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 RAI14Q9P0K7 980 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 CFAP45Q9UL16 551 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 RNF114Q9Y508 228 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 SLC4A4Q9Y6R1 1079 aa7.21□□□□□ -1.26
ITGA6-211ENST00000497107 PDS5AQ29RF7 1337 aaKnown RBP7.21□□□□□ -1.26
ITGA6-211ENST00000497107 GSG1L2A8MUP6 293 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 CPLX1O14810 134 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 SCAMP3O14828 347 aaKnown RBP7.2□□□□□ -1.26
ITGA6-211ENST00000497107 MED26O95402 600 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 CTDNEP1O95476 244 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 NFICP08651 508 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 HIBADHP31937 336 aaKnown RBP7.2□□□□□ -1.26
ITGA6-211ENST00000497107 TDO2P48775 406 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 LIG3P49916 1009 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 ANTXR2P58335 489 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 CCDC173Q0VFZ6 552 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 RESTQ13127 1097 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 CPSF6Q16630 551 aaKnown RBP eCLIP7.2□□□□□ -1.26
ITGA6-211ENST00000497107 AKNAD1Q5T1N1 836 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 RASIP1Q5U651 963 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 SYNE3Q6ZMZ3 975 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 MFSD6Q6ZSS7 791 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 SMIM5Q71RC9 77 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 FAM84BQ96KN1 310 aaPredicted RBP7.2□□□□□ -1.26
ITGA6-211ENST00000497107 SPATA32Q96LK8 384 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 ZNF396Q96N95 335 aaPredicted RBP7.2□□□□□ -1.26
ITGA6-211ENST00000497107 MTA3Q9BTC8 594 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 RNF41Q9H4P4 317 aaPredicted RBP7.2□□□□□ -1.26
ITGA6-211ENST00000497107 NCOA5Q9HCD5 579 aaKnown RBP7.2□□□□□ -1.26
ITGA6-211ENST00000497107 ABCF2Q9UG63 623 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 PRKAG2Q9UGJ0 569 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 PCDHA4Q9UN74 947 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 ANGEL1Q9UNK9 670 aaKnown RBP7.2□□□□□ -1.26
ITGA6-211ENST00000497107 LY75O60449 1722 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 DOCK2Q92608 1830 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 CARMIL3Q8ND23 1372 aa7.2□□□□□ -1.26
ITGA6-211ENST00000497107 COL24A1Q17RW2 1714 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 GOLGA8BA8MQT2 603 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 KIAA1324LA8MWY0 1029 aaPredicted RBP7.19□□□□□ -1.26
ITGA6-211ENST00000497107 B4E1Z4 1266 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 SH2B2O14492 632 aaPredicted RBP7.19□□□□□ -1.26
ITGA6-211ENST00000497107 CDKL5O76039 1030 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 SART3Q15020 963 aaKnown RBP7.19□□□□□ -1.26
ITGA6-211ENST00000497107 SPTY2D1Q68D10 685 aaPredicted RBP7.19□□□□□ -1.26
ITGA6-211ENST00000497107 NFXL1Q6ZNB6 911 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 AGMOQ6ZNB7 445 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 CYB5R4Q7L1T6 521 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 TTC6Q86TZ1 520 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 ZDHHC13Q8IUH4 622 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 TBC1D10CQ8IV04 446 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 SMYD4Q8IYR2 804 aaPredicted RBP7.19□□□□□ -1.26
ITGA6-211ENST00000497107 FAM43AQ8N2R8 423 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 TMTC2Q8N394 836 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 LCORLQ8N3X6 602 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 RNF214Q8ND24 703 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 SHKBP1Q8TBC3 707 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 LEO1Q8WVC0 666 aaPredicted RBP7.19□□□□□ -1.26
ITGA6-211ENST00000497107 TRIM44Q96DX7 344 aaPredicted RBP7.19□□□□□ -1.26
ITGA6-211ENST00000497107 MFSD14AQ96MC6 490 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 PPP1R9BQ96SB3 815 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 ORC3Q9UBD5 711 aaPredicted RBP7.19□□□□□ -1.26
ITGA6-211ENST00000497107 LEMD3Q9Y2U8 911 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 DAGLAQ9Y4D2 1042 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 SALL1Q9NSC2 1324 aa7.19□□□□□ -1.26
ITGA6-211ENST00000497107 C4BP0C0L5 1744 aa7.18□□□□□ -1.26
ITGA6-211ENST00000497107 SBF2Q86WG5 1849 aa7.18□□□□□ -1.26
ITGA6-211ENST00000497107 TAF1LQ8IZX4 1826 aa7.18□□□□□ -1.26
ITGA6-211ENST00000497107 MYO5AQ9Y4I1 1855 aaKnown RBP7.18□□□□□ -1.26
ITGA6-211ENST00000497107 ERICH2A1L162 156 aa7.18□□□□□ -1.26
ITGA6-211ENST00000497107 CCDC69A6NI79 296 aa7.18□□□□□ -1.26
ITGA6-211ENST00000497107 IFIT3O14879 490 aaKnown RBP7.18□□□□□ -1.26
ITGA6-211ENST00000497107 ZBTB43O43298 467 aa7.18□□□□□ -1.26
ITGA6-211ENST00000497107 PRKAB2O43741 272 aa7.18□□□□□ -1.26
ITGA6-211ENST00000497107 TM4SF1P30408 202 aa7.18□□□□□ -1.26
ITGA6-211ENST00000497107 GRIK1P39086 918 aa7.18□□□□□ -1.26
ITGA6-211ENST00000497107 LIFRP42702 1097 aa7.18□□□□□ -1.26
ITGA6-211ENST00000497107 METAP2P50579 478 aaKnown RBP eCLIP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms