RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 PLAAQ9Y263 795 aa15.68■□□□□ 0.1
PTPN9-206ENST00000618819 PGRMC1O00264 195 aaKnown RBP15.67■□□□□ 0.1
PTPN9-206ENST00000618819 GAS2L3Q86XJ1 694 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 A0A087WWV3 80 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 CCDC195A0A1B0GUA6 201 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 H7C1D1 291 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 MYO1FO00160 1098 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 HSPA4LO95757 839 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 KRT1P04264 644 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 PKP1Q13835 747 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 LINS1Q8NG48 757 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 DBNDD2Q9BQY9 259 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 DENND2AQ9ULE3 1009 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 SMCO2A6NFE2 343 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 KRT8P05787 483 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 RAD23BP54727 409 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 MYL7Q01449 175 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 SPATA1Q5VX52 437 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 REXO1Q8N1G1 1221 aaKnown RBP15.67■□□□□ 0.1
PTPN9-206ENST00000618819 NFU1Q9UMS0 254 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 KDM3AQ9Y4C1 1321 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 SRGAP2BP0DMP2 458 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 EXOC3L4Q17RC7 722 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 MLXIPLQ9NP71 852 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 PICK1Q9NRD5 415 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 BRD1O95696 1058 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 APOA1P02647 267 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 EPHB1P54762 984 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 CRLF3Q8IUI8 442 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 PARP9Q8IXQ6 854 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 CNPY4Q8N129 248 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 HESX1Q9UBX0 185 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 PCDHB4Q9Y5E5 795 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 RNF103-CHMP3A0A140T963 221 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 ERFP50548 548 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 HDAC4P56524 1084 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 TERF2Q15554 542 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 L3MBTL1Q9Y468 752 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 MDM2Q00987 491 aaPredicted RBP15.67■□□□□ 0.1
PTPN9-206ENST00000618819 C10orf76Q5T2E6 689 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 ICA1LQ8NDH6 482 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 ECT2Q9H8V3 914 aa15.67■□□□□ 0.1
PTPN9-206ENST00000618819 DAPK1P53355 1430 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 TBC1D10BQ4KMP7 808 aaPredicted RBP15.66■□□□□ 0.1
PTPN9-206ENST00000618819 GAPVD1Q14C86 1478 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 M0QZ92 97 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 PNMA6AP0CW24 399 aaPredicted RBP15.66■□□□□ 0.1
PTPN9-206ENST00000618819 TAGAPQ8N103 731 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 NEK9Q8TD19 979 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 ZNF594Q96JF6 807 aaPredicted RBP15.66■□□□□ 0.1
PTPN9-206ENST00000618819 CLIC4Q9Y696 253 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 RASSF10A6NK89 507 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 XAGE2Q96GT9 111 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 ALS2CLQ60I27 953 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 SMYD4Q8IYR2 804 aaPredicted RBP15.66■□□□□ 0.1
PTPN9-206ENST00000618819 GJA10Q969M2 543 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 KIF1CO43896 1103 aaKnown RBP15.66■□□□□ 0.1
PTPN9-206ENST00000618819 ARMCX5Q6P1M9 558 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 FMO2Q99518 471 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 HACD3Q9P035 362 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 SGSM2O43147 1006 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 LRRN2O75325 713 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 TMPRSS15P98073 1019 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 CYTH1Q15438 398 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 FAM161BQ96MY7 647 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 NUDCD1Q96RS6 583 aa15.66■□□□□ 0.1
PTPN9-206ENST00000618819 AFPP02771 609 aaKnown RBP15.65■□□□□ 0.1
PTPN9-206ENST00000618819 BTNL9Q6UXG8 535 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 GSDMAQ96QA5 445 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 N4BP1O75113 896 aaKnown RBP15.65■□□□□ 0.1
PTPN9-206ENST00000618819 HSPD1P10809 573 aaKnown RBP15.65■□□□□ 0.1
PTPN9-206ENST00000618819 PDXDC1Q6P996 788 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 KRT28Q7Z3Y7 464 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 GLG1Q92896 1179 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 FAM8A1Q9UBU6 413 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 ARHGAP10A1A4S6 786 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 E7EWF7 191 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 TRAF7Q6Q0C0 670 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 FAM180AQ6UWF9 173 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 TMEM60Q9H2L4 133 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 SOX5P35711 763 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 AP2B1P63010 937 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 BBS9Q3SYG4 887 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 SUPT20HQ8NEM7 779 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 APPBP2Q92624 585 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 NYXQ9GZU5 481 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 CDV3Q9UKY7 258 aaKnown RBP15.65■□□□□ 0.1
PTPN9-206ENST00000618819 COPG1Q9Y678 874 aaKnown RBP15.65■□□□□ 0.1
PTPN9-206ENST00000618819 GOLGA8SH3BPF8 625 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 TMED10P49755 219 aaKnown RBP15.65■□□□□ 0.1
PTPN9-206ENST00000618819 OLFM3Q96PB7 478 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 TUBGCP2Q9BSJ2 902 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 GLT8D2Q9H1C3 349 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 SUGT1Q9Y2Z0 365 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 MAP3K1Q13233 1512 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 SYMPKQ92797 1274 aaKnown RBP15.65■□□□□ 0.1
PTPN9-206ENST00000618819 KLC2Q9H0B6 622 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 STOML1Q9UBI4 398 aa15.65■□□□□ 0.1
PTPN9-206ENST00000618819 FRMPD2Q68DX3 1309 aaPredicted RBP15.64■□□□□ 0.09
PTPN9-206ENST00000618819 NCOA1Q15788 1441 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms