RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 NASPP49321 788 aaPredicted RBP9.53□□□□□ -0.88
PSMB3-208ENST00000613870 SLC39A14Q15043 492 aa9.53□□□□□ -0.88
PSMB3-208ENST00000613870 TKFCQ3LXA3 575 aa9.53□□□□□ -0.88
PSMB3-208ENST00000613870 MUM1L1Q5H9M0 696 aa9.53□□□□□ -0.88
PSMB3-208ENST00000613870 MAP3K21Q5TCX8 1036 aa9.53□□□□□ -0.88
PSMB3-208ENST00000613870 RNF207Q6ZRF8 634 aa9.53□□□□□ -0.88
PSMB3-208ENST00000613870 LINC00301Q8NCQ3 95 aa9.53□□□□□ -0.88
PSMB3-208ENST00000613870 NAP1L4Q99733 375 aaKnown RBP9.53□□□□□ -0.88
PSMB3-208ENST00000613870 MOV10L1Q9BXT6 1211 aaKnown RBP9.53□□□□□ -0.88
PSMB3-208ENST00000613870 ANO3Q9BYT9 981 aa9.53□□□□□ -0.88
PSMB3-208ENST00000613870 CRISPLD2Q9H0B8 497 aa9.53□□□□□ -0.88
PSMB3-208ENST00000613870 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.53□□□□□ -0.88
PSMB3-208ENST00000613870 ACAD9Q9H845 621 aa9.53□□□□□ -0.88
PSMB3-208ENST00000613870 RANBP2P49792 3224 aaKnown RBP9.52□□□□□ -0.88
PSMB3-208ENST00000613870 M0R2N6 131 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 MEIS2O14770 477 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 NEMFO60524 1076 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 RGS2P41220 211 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 CCNA1P78396 465 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 CACNB2Q08289 660 aaPredicted RBP9.52□□□□□ -0.89
PSMB3-208ENST00000613870 MAP2K5Q13163 448 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 PTGDRQ13258 359 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 DNAH12Q6ZR08 3092 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 CCDC73Q6ZRK6 1079 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 ANKRD35Q8N283 1001 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 KRI1Q8N9T8 703 aaKnown RBP9.52□□□□□ -0.89
PSMB3-208ENST00000613870 TMEM87AQ8NBN3 555 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 CLEC4DQ8WXI8 215 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 TBC1D5Q92609 795 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 SPATC1LQ9H0A9 340 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 HMX1Q9NP08 348 aaPredicted RBP9.52□□□□□ -0.89
PSMB3-208ENST00000613870 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.52□□□□□ -0.89
PSMB3-208ENST00000613870 FLRT1Q9NZU1 646 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 FBXO40Q9UH90 709 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 DDX25Q9UHL0 483 aaKnown RBP9.52□□□□□ -0.89
PSMB3-208ENST00000613870 ADAMTS5Q9UNA0 930 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 ELP1O95163 1332 aa9.52□□□□□ -0.89
PSMB3-208ENST00000613870 SZT2Q5T011 3432 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 ALPK3Q96L96 1907 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 SLC15A5A6NIM6 579 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 PIK3CDO00329 1044 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 OPLAHO14841 1288 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 ATP2A1O14983 1001 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 CUTAO60888 179 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 PPP6R2O75170 966 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 SLC25A27O95847 323 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 HOXC6P09630 235 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 PRKAR2AP13861 404 aaKnown RBP9.51□□□□□ -0.89
PSMB3-208ENST00000613870 CAPN2P17655 700 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 ERCC3P19447 782 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 COPB2P35606 906 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 CLK2P49760 499 aaKnown RBP9.51□□□□□ -0.89
PSMB3-208ENST00000613870 ARHGAP4P98171 946 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 BAATQ14032 418 aaPredicted RBP9.51□□□□□ -0.89
PSMB3-208ENST00000613870 GRB14Q14449 540 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 CALCRLQ16602 461 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 ARHGEF16Q5VV41 709 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 SLC30A10Q6XR72 485 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 TEX2Q8IWB9 1127 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 TRMT44Q8IYL2 757 aaKnown RBP9.51□□□□□ -0.89
PSMB3-208ENST00000613870 FSIP1Q8NA03 581 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 CHST13Q8NET6 341 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 REPS2Q8NFH8 660 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 NPLOC4Q8TAT6 608 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 SYAP1Q96A49 352 aaPredicted RBP9.51□□□□□ -0.89
PSMB3-208ENST00000613870 PAWRQ96IZ0 340 aaKnown RBP9.51□□□□□ -0.89
PSMB3-208ENST00000613870 APBA2Q99767 749 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
PSMB3-208ENST00000613870 FAM13BQ9NYF5 915 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 ZNF214Q9UL59 606 aaPredicted RBP9.51□□□□□ -0.89
PSMB3-208ENST00000613870 PCDHA7Q9UN72 937 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 RIPK3Q9Y572 518 aa9.51□□□□□ -0.89
PSMB3-208ENST00000613870 VWA3AA6NCI4 1184 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 FARP2O94887 1054 aaPredicted RBP9.5□□□□□ -0.89
PSMB3-208ENST00000613870 TDP2O95551 362 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 IGHA2P01877 340 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 MYCLP12524 364 aaPredicted RBP9.5□□□□□ -0.89
PSMB3-208ENST00000613870 GCFC2P16383 781 aaKnown RBP9.5□□□□□ -0.89
PSMB3-208ENST00000613870 EIF2AK2P19525 551 aaKnown RBP9.5□□□□□ -0.89
PSMB3-208ENST00000613870 CCND3P30281 292 aaPredicted RBP9.5□□□□□ -0.89
PSMB3-208ENST00000613870 MNX1P50219 401 aaPredicted RBP9.5□□□□□ -0.89
PSMB3-208ENST00000613870 HSD17B4P51659 736 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 USP11P51784 963 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 RPS6P62753 249 aaKnown RBP9.5□□□□□ -0.89
PSMB3-208ENST00000613870 KCTD2Q14681 263 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 PTPAQ15257 358 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 TMEM266Q2M3C6 531 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 PRR16Q569H4 304 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 LHX8Q68G74 356 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 CAVIN1Q6NZI2 390 aaKnown RBP9.5□□□□□ -0.89
PSMB3-208ENST00000613870 DTHD1Q6ZMT9 781 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 RIOX2Q8IUF8 465 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 SAMD3Q8N6K7 520 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 SHCBP1Q8NEM2 672 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 RASSF8Q8NHQ8 419 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 SYTL5Q8TDW5 730 aaPredicted RBP9.5□□□□□ -0.89
PSMB3-208ENST00000613870 MRPS27Q92552 414 aaKnown RBP9.5□□□□□ -0.89
PSMB3-208ENST00000613870 DPF3Q92784 378 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 FERMT2Q96AC1 680 aa9.5□□□□□ -0.89
PSMB3-208ENST00000613870 CLIC6Q96NY7 704 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms