RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 ZBED9Q6R2W3 1325 aa9.81□□□□□ -0.84
DNMT1-224ENST00000591764 ZEB2O60315 1214 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 TAL1P17542 331 aaPredicted RBP9.8□□□□□ -0.84
DNMT1-224ENST00000591764 CTSOP43234 321 aaPredicted RBP9.8□□□□□ -0.84
DNMT1-224ENST00000591764 EPHB4P54760 987 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 RELBQ01201 579 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 DHX9Q08211 1270 aaKnown RBP9.8□□□□□ -0.84
DNMT1-224ENST00000591764 UBE3CQ15386 1083 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 MAMDC4Q6UXC1 1216 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 SIAH1Q8IUQ4 282 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 RPAP2Q8IXW5 612 aaPredicted RBP9.8□□□□□ -0.84
DNMT1-224ENST00000591764 ANKRD35Q8N283 1001 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 LENG1Q96BZ8 264 aaPredicted RBP9.8□□□□□ -0.84
DNMT1-224ENST00000591764 SEZ6LQ9BYH1 1024 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 BCL11AQ9H165 835 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 MKNK2Q9HBH9 465 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 FBXO28Q9NVF7 368 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 TBX21Q9UL17 535 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 GPSM3Q9Y4H4 160 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 SLC4A4Q9Y6R1 1079 aa9.8□□□□□ -0.84
DNMT1-224ENST00000591764 ARVCFO00192 962 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 ATP2A1O14983 1001 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 CABYRO75952 493 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 ASGR1P07306 291 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 RLBP1P12271 317 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 ATP5JP18859 108 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 OAZ1P54368 228 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 RAB15P59190 212 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 MRPS5P82675 430 aaKnown RBP9.79□□□□□ -0.84
DNMT1-224ENST00000591764 KRT76Q01546 638 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 ACVR2BQ13705 512 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 GNASQ5JWF2 1037 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 NOL8Q76FK4 1167 aaKnown RBP9.79□□□□□ -0.84
DNMT1-224ENST00000591764 KLHDC9Q8NEP7 349 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 CHST13Q8NET6 341 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 REPS2Q8NFH8 660 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 HAUS7Q99871 368 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.79□□□□□ -0.845e-12■■■□□ 16.1
DNMT1-224ENST00000591764 BOLA2Q9H3K6 86 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 NYAP2Q9P242 653 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 SYNPO2Q9UMS6 1093 aa9.79□□□□□ -0.84
DNMT1-224ENST00000591764 DNAJC25-GNG10A0A024R161 153 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 PRKAB2O43741 272 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 SNAI1O95863 264 aaPredicted RBP9.78□□□□□ -0.84
DNMT1-224ENST00000591764 CSF2RAP15509 400 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 IGFBP4P22692 258 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 AAK1Q2M2I8 961 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 LRRFIP1Q32MZ4 808 aaKnown RBP9.78□□□□□ -0.84
DNMT1-224ENST00000591764 CCDC144BQ3MJ40 725 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 GIMAP6Q6P9H5 292 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 CTR9Q6PD62 1173 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 CPXCR1Q8N123 301 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 PPM1EQ8WY54 764 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 GPATCH3Q96I76 525 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 INSM2Q96T92 566 aaPredicted RBP9.78□□□□□ -0.84
DNMT1-224ENST00000591764 PBX4Q9BYU1 374 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 UPF3AQ9H1J1 476 aaKnown RBP9.78□□□□□ -0.84
DNMT1-224ENST00000591764 SLC28A3Q9HAS3 691 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 FEM1BQ9UK73 627 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 ISY1Q9ULR0 285 aaKnown RBP9.78□□□□□ -0.84
DNMT1-224ENST00000591764 DDX19BQ9UMR2 479 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 MYH4Q9Y623 1939 aa9.78□□□□□ -0.84
DNMT1-224ENST00000591764 MCM3APO60318 1980 aa9.77□□□□□ -0.84
DNMT1-224ENST00000591764 CYP2D7A0A087X1C5 515 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 ASB14A6NK59 587 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 F5H6K3 240 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 NDUFB10O96000 172 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 GNAT2P19087 354 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 GJA9P57773 515 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 KLRC3Q07444 240 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 TMEM240Q5SV17 173 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 CCSAPQ6IQ19 270 aaPredicted RBP9.77□□□□□ -0.85
DNMT1-224ENST00000591764 ARMCX2Q7L311 632 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 FAM126BQ8IXS8 530 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 ZNF444Q8N0Y2 327 aaPredicted RBP9.77□□□□□ -0.85
DNMT1-224ENST00000591764 USP38Q8NB14 1042 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 ASB2Q96Q27 587 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 PPP1R12CQ9BZL4 782 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 AP5M1Q9H0R1 490 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 HIPK3Q9H422 1215 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 PRDM12Q9H4Q4 367 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 ZNF395Q9H8N7 513 aaPredicted RBP9.77□□□□□ -0.85
DNMT1-224ENST00000591764 IL23AQ9NPF7 189 aa9.77□□□□□ -0.85
DNMT1-224ENST00000591764 GREB1LQ9C091 1923 aaPredicted RBP9.76□□□□□ -0.85
DNMT1-224ENST00000591764 TTLL1O95922 423 aa9.76□□□□□ -0.85
DNMT1-224ENST00000591764 FGBP02675 491 aa9.76□□□□□ -0.85
DNMT1-224ENST00000591764 SLC3A2P08195 630 aaKnown RBP9.76□□□□□ -0.85
DNMT1-224ENST00000591764 TDO2P48775 406 aa9.76□□□□□ -0.85
DNMT1-224ENST00000591764 CDK7P50613 346 aa9.76□□□□□ -0.85
DNMT1-224ENST00000591764 HNRNPUQ00839 825 aaKnown RBP eCLIP9.76□□□□□ -0.85
DNMT1-224ENST00000591764 IKQ13123 557 aaPredicted RBP9.76□□□□□ -0.85
DNMT1-224ENST00000591764 SBK1Q52WX2 424 aa9.76□□□□□ -0.85
DNMT1-224ENST00000591764 RASIP1Q5U651 963 aa9.76□□□□□ -0.85
DNMT1-224ENST00000591764 ZNF365Q70YC5 407 aa9.76□□□□□ -0.85
DNMT1-224ENST00000591764 TLK2Q86UE8 772 aa9.76□□□□□ -0.85
DNMT1-224ENST00000591764 RPUSD2Q8IZ73 545 aaKnown RBP9.76□□□□□ -0.85
DNMT1-224ENST00000591764 CCDC155Q8N6L0 562 aa9.76□□□□□ -0.85
DNMT1-224ENST00000591764 PANK1Q8TE04 598 aa9.76□□□□□ -0.85
DNMT1-224ENST00000591764 ADAMTS19Q8TE59 1207 aa9.76□□□□□ -0.85
DNMT1-224ENST00000591764 HERVK_113Q902F9 699 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms