RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 ME1P48163 572 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 GJA8P48165 433 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 NONOQ15233 471 aaKnown RBP eCLIP9.57□□□□□ -0.88
PSMB3-208ENST00000613870 RILPL1Q5EBL4 403 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 TTC38Q5R3I4 469 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 PRPF38BQ5VTL8 546 aaKnown RBP9.57□□□□□ -0.88
PSMB3-208ENST00000613870 ANO1Q5XXA6 986 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 LBX2Q6XYB7 198 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 DAGLBQ8NCG7 672 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 GTF3C2Q8WUA4 911 aaPredicted RBP9.57□□□□□ -0.88
PSMB3-208ENST00000613870 USP28Q96RU2 1077 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 FTOQ9C0B1 505 aaKnown RBP eCLIP9.57□□□□□ -0.88
PSMB3-208ENST00000613870 SLC38A10Q9HBR0 1119 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 BTBD7Q9P203 1132 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 CEP131Q9UPN4 1083 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 RABGAP1Q9Y3P9 1069 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 CLIC4Q9Y696 253 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 PARP14Q460N5 1801 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 SPDYE16A6NNV3 312 aaPredicted RBP9.56□□□□□ -0.88
PSMB3-208ENST00000613870 MARCH6O60337 910 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 SGPL1O95470 568 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 CYP2B6P20813 491 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 MAPK4P31152 587 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 HOXA13P31271 388 aaPredicted RBP9.56□□□□□ -0.88
PSMB3-208ENST00000613870 TRIM32Q13049 653 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 ZNF174Q15697 407 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 INF2Q27J81 1249 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 LETM2Q2VYF4 491 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 MCTP2Q6DN12 878 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 SNRNP48Q6IEG0 339 aaKnown RBP9.56□□□□□ -0.88
PSMB3-208ENST00000613870 USP17L6PQ6QN14 398 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 CLEC17AQ6ZS10 378 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 GPR142Q7Z601 462 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 FCHSD1Q86WN1 690 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 MCF2L2Q86YR7 1114 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 KCNG4Q8TDN1 519 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 U2AF1L4Q8WU68 220 aaKnown RBP9.56□□□□□ -0.88
PSMB3-208ENST00000613870 LEO1Q8WVC0 666 aaPredicted RBP9.56□□□□□ -0.88
PSMB3-208ENST00000613870 USP6NLQ92738 828 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 PGBD1Q96JS3 809 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 EHMT1Q9H9B1 1298 aa9.56□□□□□ -0.88
PSMB3-208ENST00000613870 DDX49Q9Y6V7 483 aaKnown RBP9.56□□□□□ -0.88
PSMB3-208ENST00000613870 ADAMTS3O15072 1205 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 SPTLC2O15270 562 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 MCM7P33993 719 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 ZNF76P36508 570 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 STAT3P40763 770 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 NPY5RQ15761 445 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 EARS2Q5JPH6 523 aaKnown RBP9.55□□□□□ -0.88
PSMB3-208ENST00000613870 MORN1Q5T089 497 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 WDR78Q5VTH9 848 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 NSMFQ6X4W1 530 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 UBE2Q1Q7Z7E8 422 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 CCAR1Q8IX12 1150 aaKnown RBP9.55□□□□□ -0.88
PSMB3-208ENST00000613870 MB21D1Q8N884 522 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 TRIB2Q92519 343 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 TRERF1Q96PN7 1200 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 NUDT12Q9BQG2 462 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 TEX13BQ9BXU2 312 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 PAK6Q9NQU5 681 aaPredicted RBP9.55□□□□□ -0.88
PSMB3-208ENST00000613870 RNF146Q9NTX7 359 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 RTEL1Q9NZ71 1219 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 CEP290O15078 2479 aa9.55□□□□□ -0.88
PSMB3-208ENST00000613870 COL11A1P12107 1806 aaPredicted RBP9.54□□□□□ -0.88
PSMB3-208ENST00000613870 A0A0G2JMZ2 1700 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 TRAK2O60296 914 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 CCNT1O60563 726 aaKnown RBP9.54□□□□□ -0.88
PSMB3-208ENST00000613870 GADD45BO75293 160 aaPredicted RBP9.54□□□□□ -0.88
PSMB3-208ENST00000613870 YEATS4O95619 227 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 BMP15O95972 392 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 FOSP01100 380 aaPredicted RBP9.54□□□□□ -0.88
PSMB3-208ENST00000613870 HMGCRP04035 888 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 XRCC5P13010 732 aaKnown RBP9.54□□□□□ -0.88
PSMB3-208ENST00000613870 MARCKSP29966 332 aaPredicted RBP9.54□□□□□ -0.88
PSMB3-208ENST00000613870 TRAPPC10P48553 1259 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 TOB1P50616 345 aaPredicted RBP9.54□□□□□ -0.88
PSMB3-208ENST00000613870 OAZ1P54368 228 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 UBE2HP62256 183 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 AP3B2Q13367 1082 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 TMEM132BQ14DG7 1078 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 CCL14Q16627 93 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 SKOR2Q2VWA4 1001 aaPredicted RBP9.54□□□□□ -0.88
PSMB3-208ENST00000613870 PLEKHH3Q7Z736 793 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 NEK8Q86SG6 692 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 NCAPG2Q86XI2 1143 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 TBCKQ8TEA7 893 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 SOCS4Q8WXH5 440 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 TNFRSF25Q93038 417 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 DEFB118Q96PH6 123 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 LMBRD1Q9NUN5 540 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 POLR3EQ9NVU0 708 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 RCOR1Q9UKL0 485 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 PCDHB6Q9Y5E3 794 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 ZNFX1Q9P2E3 1918 aaKnown RBP9.54□□□□□ -0.88
PSMB3-208ENST00000613870 ZNF536O15090 1300 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 RPTORQ8N122 1335 aa9.54□□□□□ -0.88
PSMB3-208ENST00000613870 NFIBO00712 420 aa9.53□□□□□ -0.88
PSMB3-208ENST00000613870 MBD3O95983 291 aa9.53□□□□□ -0.88
PSMB3-208ENST00000613870 TFRCP02786 760 aaKnown RBP9.53□□□□□ -0.88
PSMB3-208ENST00000613870 PTPREP23469 700 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms