RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 ACTN3Q08043 901 aaPredicted RBP11.58□□□□□ -0.56
USB1-212ENST00000566082 ITIH6Q6UXX5 1313 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 CCDC50Q8IVM0 306 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 PLAAQ9Y263 795 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 FRMPD2Q68DX3 1309 aaPredicted RBP11.58□□□□□ -0.56
USB1-212ENST00000566082 TARSL2A2RTX5 802 aaKnown RBP11.58□□□□□ -0.56
USB1-212ENST00000566082 SPOPO43791 374 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 PALMO75781 387 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 H2AFZP0C0S5 128 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 CYP2D6P10635 497 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 KLK7P49862 253 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 ADAM9Q13443 819 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 STXBP4Q6ZWJ1 553 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 H2AFVQ71UI9 128 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 TMC4Q7Z404 712 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 BANK1Q8NDB2 785 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 TBCKQ8TEA7 893 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 PANK4Q9NVE7 773 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 EHD2Q9NZN4 543 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 ARMCX3Q9UH62 379 aaPredicted RBP11.58□□□□□ -0.56
USB1-212ENST00000566082 AMFRQ9UKV5 643 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 TECPR2O15040 1411 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 BACH1O14867 736 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 USP17L8P0C7I0 530 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 FCER1AP12319 257 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 LACTBP83111 547 aaPredicted RBP11.57□□□□□ -0.56
USB1-212ENST00000566082 FKBP3Q00688 224 aaKnown RBP11.57□□□□□ -0.56
USB1-212ENST00000566082 CCDC6Q16204 474 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 NTRK3Q16288 839 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 ARHGAP44Q17R89 818 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 GPBP1Q86WP2 473 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 ANKRD42Q8N9B4 389 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 DYNLL2Q96FJ2 89 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 MS4A14Q96JA4 679 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 EYA3Q99504 573 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.57□□□□□ -0.561e-12■■■■■ 111.8
USB1-212ENST00000566082 CTTNBP2NLQ9P2B4 639 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 CTNND1O60716 968 aaKnown RBP11.57□□□□□ -0.56
USB1-212ENST00000566082 KSR1Q8IVT5 923 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 MICAL1Q8TDZ2 1067 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 FBF1Q8TES7 1133 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 NAP1L3Q99457 506 aaPredicted RBP11.57□□□□□ -0.56
USB1-212ENST00000566082 PLVAPQ9BX97 442 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 LACRTQ9GZZ8 138 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 CUEDC2Q9H467 287 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 VEZTQ9HBM0 779 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 CCDC87Q9NVE4 849 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 PCDHA12Q9UN75 941 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 A0A1W2PQC6 194 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 SPDYE3A6NKU9 549 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 XRCC5P13010 732 aaKnown RBP11.57□□□□□ -0.56
USB1-212ENST00000566082 DHX9Q08211 1270 aaKnown RBP11.57□□□□□ -0.56
USB1-212ENST00000566082 DDB1Q16531 1140 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 KANSL2Q9H9L4 492 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 MTUS1Q9ULD2 1270 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 ATP6V0A2Q9Y487 856 aa11.57□□□□□ -0.56
USB1-212ENST00000566082 BAZ2BQ9UIF8 2168 aaKnown RBP11.57□□□□□ -0.56
USB1-212ENST00000566082 IFT172Q9UG01 1749 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 USP17L3A6NCW0 530 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 USP17L4A6NCW7 530 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 PSMD14O00487 310 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 EIF3HO15372 352 aaKnown RBP eCLIP11.56□□□□□ -0.56
USB1-212ENST00000566082 LLGL1Q15334 1064 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 TXNRD1Q16881 649 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 SEL1L2Q5TEA6 688 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 ANKRD40Q6AI12 368 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 HIBCHQ6NVY1 386 aaPredicted RBP11.56□□□□□ -0.56
USB1-212ENST00000566082 USP17L1Q7RTZ2 530 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 CCDC105Q8IYK2 499 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 ADSSL1Q8N142 457 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 RDH13Q8NBN7 331 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 N4BP2L2Q92802 583 aaPredicted RBP11.56□□□□□ -0.56
USB1-212ENST00000566082 DLG5Q8TDM6 1919 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 GCNT3O95395 438 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 NEDD9Q14511 834 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 WDR93Q6P2C0 686 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 SRBD1Q8N5C6 995 aaKnown RBP11.56□□□□□ -0.56
USB1-212ENST00000566082 PIGBQ92521 554 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 MRRFQ96E11 262 aaKnown RBP11.56□□□□□ -0.56
USB1-212ENST00000566082 CCDC77Q9BR77 488 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 RAB17Q9H0T7 212 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 RAB21Q9UL25 225 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 CLTCQ00610 1675 aaKnown RBP11.56□□□□□ -0.56
USB1-212ENST00000566082 MAP2K7O14733 419 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 CHMP2AO43633 222 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 MYL1P05976 194 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 STAT1P42224 750 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 PFKFB3Q16875 520 aaPredicted RBP11.56□□□□□ -0.56
USB1-212ENST00000566082 SYCE1Q8N0S2 351 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 AK8Q96MA6 479 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 LZTS2Q9BRK4 669 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 PHF20Q9BVI0 1012 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 ANKRD2Q9GZV1 360 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 ATP8A2Q9NTI2 1148 aa11.56□□□□□ -0.56
USB1-212ENST00000566082 DMGDHQ9UI17 866 aaKnown RBP11.56□□□□□ -0.56
USB1-212ENST00000566082 HLA-DOAP06340 250 aa11.55□□□□□ -0.56
USB1-212ENST00000566082 RPS8P62241 208 aaKnown RBP11.55□□□□□ -0.56
USB1-212ENST00000566082 USP17L2Q6R6M4 530 aa11.55□□□□□ -0.56
USB1-212ENST00000566082 TPTE2Q6XPS3 522 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms