RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 ARIH2O95376 493 aa22.96■■□□□ 1.27
CACNA1C-230ENST00000543114 ASPRV1Q53RT3 343 aa22.96■■□□□ 1.27
CACNA1C-230ENST00000543114 RGS22Q8NE09 1264 aa22.96■■□□□ 1.27
CACNA1C-230ENST00000543114 TBC1D5Q92609 795 aa22.96■■□□□ 1.27
CACNA1C-230ENST00000543114 VWCEQ96DN2 955 aa22.96■■□□□ 1.27
CACNA1C-230ENST00000543114 COL20A1Q9P218 1284 aa22.96■■□□□ 1.27
CACNA1C-230ENST00000543114 ABCB11O95342 1321 aa22.96■■□□□ 1.27
CACNA1C-230ENST00000543114 CYP2C9P11712 490 aa22.95■■□□□ 1.26
CACNA1C-230ENST00000543114 GSPT1P15170 499 aaKnown RBP22.95■■□□□ 1.26
CACNA1C-230ENST00000543114 PDE4AP27815 886 aa22.95■■□□□ 1.26
CACNA1C-230ENST00000543114 QRICH1Q2TAL8 776 aa22.95■■□□□ 1.26
CACNA1C-230ENST00000543114 OTOP2Q7RTS6 562 aa22.95■■□□□ 1.26
CACNA1C-230ENST00000543114 PPP1R13LQ8WUF5 828 aa22.95■■□□□ 1.26
CACNA1C-230ENST00000543114 RAD50Q92878 1312 aa22.95■■□□□ 1.26
CACNA1C-230ENST00000543114 SCLYQ96I15 445 aa22.95■■□□□ 1.26
CACNA1C-230ENST00000543114 MTG1Q9BT17 334 aaPredicted RBP22.95■■□□□ 1.26
CACNA1C-230ENST00000543114 FGBP02675 491 aa22.94■■□□□ 1.26
CACNA1C-230ENST00000543114 TXNP10599 105 aaKnown RBP22.94■■□□□ 1.26
CACNA1C-230ENST00000543114 USP38Q8NB14 1042 aa22.94■■□□□ 1.26
CACNA1C-230ENST00000543114 KRT23Q9C075 422 aa22.94■■□□□ 1.26
CACNA1C-230ENST00000543114 CTNNA3Q9UI47 895 aa22.94■■□□□ 1.26
CACNA1C-230ENST00000543114 A6NJR5 290 aa22.93■■□□□ 1.26
CACNA1C-230ENST00000543114 PARP1P09874 1014 aaKnown RBP22.93■■□□□ 1.26
CACNA1C-230ENST00000543114 SYTL5Q8TDW5 730 aaPredicted RBP22.93■■□□□ 1.26
CACNA1C-230ENST00000543114 TAAR1Q96RJ0 339 aa22.93■■□□□ 1.26
CACNA1C-230ENST00000543114 UBAC1Q9BSL1 405 aa22.93■■□□□ 1.26
CACNA1C-230ENST00000543114 MTIF3Q9H2K0 278 aaKnown RBP22.93■■□□□ 1.26
CACNA1C-230ENST00000543114 CNNM2Q9H8M5 875 aa22.93■■□□□ 1.26
CACNA1C-230ENST00000543114 GPHNQ9NQX3 736 aaPredicted RBP22.93■■□□□ 1.26
CACNA1C-230ENST00000543114 B4DLN1 442 aa22.92■■□□□ 1.26
CACNA1C-230ENST00000543114 DHX16O60231 1041 aaKnown RBP22.92■■□□□ 1.26
CACNA1C-230ENST00000543114 MRPL12P52815 198 aaKnown RBP22.92■■□□□ 1.26
CACNA1C-230ENST00000543114 TTLL4Q14679 1199 aa22.92■■□□□ 1.26
CACNA1C-230ENST00000543114 NBPF20Q3BBV1 942 aa22.92■■□□□ 1.26
CACNA1C-230ENST00000543114 BRDTQ58F21 947 aaPredicted RBP22.92■■□□□ 1.26
CACNA1C-230ENST00000543114 FAM47CQ5HY64 1035 aa22.92■■□□□ 1.26
CACNA1C-230ENST00000543114 STAG2Q8N3U4 1231 aa22.92■■□□□ 1.26
CACNA1C-230ENST00000543114 JMJD4Q9H9V9 463 aa22.92■■□□□ 1.26
CACNA1C-230ENST00000543114 SUPT20HL2P0C7V6 817 aa22.91■■□□□ 1.26
CACNA1C-230ENST00000543114 IFIT1BQ5T764 474 aaKnown RBP22.91■■□□□ 1.26
CACNA1C-230ENST00000543114 TTC22Q5TAA0 569 aa22.91■■□□□ 1.26
CACNA1C-230ENST00000543114 CCDC62Q6P9F0 684 aa22.91■■□□□ 1.26
CACNA1C-230ENST00000543114 FBXO11Q86XK2 927 aa22.91■■□□□ 1.26
CACNA1C-230ENST00000543114 MAF1Q9H063 256 aa22.91■■□□□ 1.26
CACNA1C-230ENST00000543114 PRDM12Q9H4Q4 367 aa22.91■■□□□ 1.26
CACNA1C-230ENST00000543114 YBX2Q9Y2T7 364 aaKnown RBP22.91■■□□□ 1.26
CACNA1C-230ENST00000543114 SEC23AQ15436 765 aa22.9■■□□□ 1.26
CACNA1C-230ENST00000543114 RAB30Q15771 203 aa22.9■■□□□ 1.26
CACNA1C-230ENST00000543114 NFRKBQ6P4R8 1299 aa22.9■■□□□ 1.26
CACNA1C-230ENST00000543114 CYB5R4Q7L1T6 521 aa22.9■■□□□ 1.26
CACNA1C-230ENST00000543114 NSUN6Q8TEA1 469 aaKnown RBP22.9■■□□□ 1.26
CACNA1C-230ENST00000543114 RMDN3Q96TC7 470 aa22.9■■□□□ 1.26
CACNA1C-230ENST00000543114 NKX2-4Q9H2Z4 354 aa22.9■■□□□ 1.26
CACNA1C-230ENST00000543114 VAT1LQ9HCJ6 419 aa22.9■■□□□ 1.26
CACNA1C-230ENST00000543114 MSRAQ9UJ68 235 aa22.9■■□□□ 1.26
CACNA1C-230ENST00000543114 OPLAHO14841 1288 aa22.89■■□□□ 1.25
CACNA1C-230ENST00000543114 KPNA6O60684 536 aa22.89■■□□□ 1.25
CACNA1C-230ENST00000543114 LY6KQ17RY6 165 aa22.89■■□□□ 1.25
CACNA1C-230ENST00000543114 SEPT14Q6ZU15 432 aa22.89■■□□□ 1.25
CACNA1C-230ENST00000543114 MCF2L2Q86YR7 1114 aa22.89■■□□□ 1.25
CACNA1C-230ENST00000543114 RPUSD2Q8IZ73 545 aaKnown RBP22.89■■□□□ 1.25
CACNA1C-230ENST00000543114 TET1Q8NFU7 2136 aa22.89■■□□□ 1.25
CACNA1C-230ENST00000543114 AFG1LQ8WV93 481 aa22.89■■□□□ 1.25
CACNA1C-230ENST00000543114 MRPL11Q9Y3B7 192 aaKnown RBP22.89■■□□□ 1.25
CACNA1C-230ENST00000543114 TRIP12Q14669 1992 aaPredicted RBP22.89■■□□□ 1.25
CACNA1C-230ENST00000543114 PPP1R11O60927 126 aaPredicted RBP22.88■■□□□ 1.25
CACNA1C-230ENST00000543114 MMP3P08254 477 aa22.88■■□□□ 1.25
CACNA1C-230ENST00000543114 EIF2AK2P19525 551 aaKnown RBP22.88■■□□□ 1.25
CACNA1C-230ENST00000543114 RABGGTBP53611 331 aa22.88■■□□□ 1.25
CACNA1C-230ENST00000543114 ARHGAP1Q07960 439 aa22.88■■□□□ 1.25
CACNA1C-230ENST00000543114 DEFB128Q7Z7B8 93 aa22.88■■□□□ 1.25
CACNA1C-230ENST00000543114 GAS2L1Q99501 681 aaPredicted RBP22.88■■□□□ 1.25
CACNA1C-230ENST00000543114 SLC4A7Q9Y6M7 1214 aa22.88■■□□□ 1.25
CACNA1C-230ENST00000543114 BAZ2BQ9UIF8 2168 aaKnown RBP22.88■■□□□ 1.25
CACNA1C-230ENST00000543114 MYH7BA7E2Y1 1941 aa22.87■■□□□ 1.25
CACNA1C-230ENST00000543114 ZBBXA8MT70 800 aa22.87■■□□□ 1.25
CACNA1C-230ENST00000543114 CFBP00751 764 aa22.87■■□□□ 1.25
CACNA1C-230ENST00000543114 GH1P01241 217 aa22.87■■□□□ 1.25
CACNA1C-230ENST00000543114 PFKMP08237 780 aa22.87■■□□□ 1.25
CACNA1C-230ENST00000543114 STXBP2Q15833 593 aa22.87■■□□□ 1.25
CACNA1C-230ENST00000543114 IWS1Q96ST2 819 aa22.87■■□□□ 1.25
CACNA1C-230ENST00000543114 AMNQ9BXJ7 453 aa22.87■■□□□ 1.25
CACNA1C-230ENST00000543114 PXMP2Q9NR77 195 aa22.87■■□□□ 1.25
CACNA1C-230ENST00000543114 MAD2L2Q9UI95 211 aa22.87■■□□□ 1.25
CACNA1C-230ENST00000543114 SUPT16HQ9Y5B9 1047 aaKnown RBP22.87■■□□□ 1.25
CACNA1C-230ENST00000543114 MUC3AQ02505 3323 aa22.87■■□□□ 1.25
CACNA1C-230ENST00000543114 REV3LO60673 3130 aa22.86■■□□□ 1.25
CACNA1C-230ENST00000543114 TTC28Q96AY4 2481 aa22.86■■□□□ 1.25
CACNA1C-230ENST00000543114 KLRF2D3W0D1 207 aa22.86■■□□□ 1.25
CACNA1C-230ENST00000543114 PITPNM1O00562 1244 aa22.86■■□□□ 1.25
CACNA1C-230ENST00000543114 HSD17B4P51659 736 aa22.86■■□□□ 1.25
CACNA1C-230ENST00000543114 CHMP4BP1P59074 171 aa22.86■■□□□ 1.25
CACNA1C-230ENST00000543114 PTPN11Q06124 597 aaPredicted RBP22.86■■□□□ 1.25
CACNA1C-230ENST00000543114 ADGRE1Q14246 886 aa22.86■■□□□ 1.25
CACNA1C-230ENST00000543114 SLC35G1Q2M3R5 365 aa22.86■■□□□ 1.25
CACNA1C-230ENST00000543114 ARHGEF16Q5VV41 709 aa22.86■■□□□ 1.25
CACNA1C-230ENST00000543114 MTMR8Q96EF0 704 aa22.86■■□□□ 1.25
CACNA1C-230ENST00000543114 TAF6LQ9Y6J9 622 aa22.86■■□□□ 1.25
CACNA1C-230ENST00000543114 PTPRSQ13332 1948 aa22.85■■□□□ 1.25
CACNA1C-230ENST00000543114 CYP21A2P08686 494 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms