RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 DIS3LQ8TF46 1054 aaKnown RBP24.87■■□□□ 1.57
NXT1-201ENST00000254998 GPKOWQ92917 476 aaPredicted RBP eCLIP24.87■■□□□ 1.57
NXT1-201ENST00000254998 PAWRQ96IZ0 340 aaKnown RBP24.87■■□□□ 1.57
NXT1-201ENST00000254998 C22orf23Q9BZE7 217 aa24.87■■□□□ 1.57
NXT1-201ENST00000254998 NCOA5Q9HCD5 579 aaKnown RBP24.87■■□□□ 1.57
NXT1-201ENST00000254998 MEIS2O14770 477 aa24.86■■□□□ 1.57
NXT1-201ENST00000254998 ADCY6O43306 1168 aa24.86■■□□□ 1.57
NXT1-201ENST00000254998 COL6A1P12109 1028 aa24.86■■□□□ 1.57
NXT1-201ENST00000254998 NEK4P51957 841 aa24.86■■□□□ 1.57
NXT1-201ENST00000254998 TNFAIP2Q03169 654 aa24.86■■□□□ 1.57
NXT1-201ENST00000254998 PFKFB3Q16875 520 aaPredicted RBP24.86■■□□□ 1.57
NXT1-201ENST00000254998 EEPD1Q7L9B9 569 aa24.86■■□□□ 1.57
NXT1-201ENST00000254998 CUL5Q93034 780 aa24.86■■□□□ 1.57
NXT1-201ENST00000254998 LARP6Q9BRS8 491 aaKnown RBP24.86■■□□□ 1.57
NXT1-201ENST00000254998 RNF26Q9BY78 433 aaPredicted RBP24.86■■□□□ 1.57
NXT1-201ENST00000254998 UPF3AQ9H1J1 476 aaKnown RBP24.86■■□□□ 1.57
NXT1-201ENST00000254998 PSTPIP2Q9H939 334 aa24.86■■□□□ 1.57
NXT1-201ENST00000254998 BARHL2Q9NY43 387 aa24.86■■□□□ 1.57
NXT1-201ENST00000254998 TPCN1Q9ULQ1 816 aa24.86■■□□□ 1.57
NXT1-201ENST00000254998 FRMPD4Q14CM0 1322 aa24.86■■□□□ 1.57
NXT1-201ENST00000254998 STXBP3O00186 592 aa24.85■■□□□ 1.57
NXT1-201ENST00000254998 NR3C2P08235 984 aa24.85■■□□□ 1.57
NXT1-201ENST00000254998 SCG2P13521 617 aa24.85■■□□□ 1.57
NXT1-201ENST00000254998 EIF2AK2P19525 551 aaKnown RBP24.85■■□□□ 1.57
NXT1-201ENST00000254998 NKX3-2P78367 333 aa24.85■■□□□ 1.57
NXT1-201ENST00000254998 LRRC41Q15345 812 aa24.85■■□□□ 1.57
NXT1-201ENST00000254998 STXBP2Q15833 593 aa24.85■■□□□ 1.57
NXT1-201ENST00000254998 LENG1Q96BZ8 264 aaPredicted RBP24.85■■□□□ 1.57
NXT1-201ENST00000254998 KIF2CQ99661 725 aa24.85■■□□□ 1.57
NXT1-201ENST00000254998 PDCD2LQ9BRP1 358 aa24.85■■□□□ 1.57
NXT1-201ENST00000254998 PDGFCQ9NRA1 345 aa24.85■■□□□ 1.57
NXT1-201ENST00000254998 MKI67P46013 3256 aaKnown RBP24.85■■□□□ 1.57
NXT1-201ENST00000254998 TNRC18O15417 2968 aaPredicted RBP24.84■■□□□ 1.57
NXT1-201ENST00000254998 PFKFB2O60825 505 aa24.84■■□□□ 1.57
NXT1-201ENST00000254998 ADAMTS4O75173 837 aa24.84■■□□□ 1.57
NXT1-201ENST00000254998 ADCYAP1R1P41586 468 aa24.84■■□□□ 1.57
NXT1-201ENST00000254998 PKN1Q16512 942 aa24.84■■□□□ 1.57
NXT1-201ENST00000254998 TYW1BQ6NUM6 668 aa24.84■■□□□ 1.57
NXT1-201ENST00000254998 FCHSD1Q86WN1 690 aa24.84■■□□□ 1.57
NXT1-201ENST00000254998 C11orf49Q9H6J7 331 aa24.84■■□□□ 1.57
NXT1-201ENST00000254998 UPF2Q9HAU5 1272 aaKnown RBP24.84■■□□□ 1.57
NXT1-201ENST00000254998 GNEQ9Y223 722 aaKnown RBP24.84■■□□□ 1.57
NXT1-201ENST00000254998 Q9Y3F1 56 aa24.84■■□□□ 1.57
NXT1-201ENST00000254998 SYNRGQ9UMZ2 1314 aa24.84■■□□□ 1.57
NXT1-201ENST00000254998 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.83■■□□□ 1.57
NXT1-201ENST00000254998 KBTBD13C9JR72 458 aa24.83■■□□□ 1.57
NXT1-201ENST00000254998 PGK1P00558 417 aa24.83■■□□□ 1.57
NXT1-201ENST00000254998 CST5P28325 142 aaPredicted RBP24.83■■□□□ 1.57
NXT1-201ENST00000254998 NAPAP54920 295 aa24.83■■□□□ 1.57
NXT1-201ENST00000254998 GJA9P57773 515 aa24.83■■□□□ 1.57
NXT1-201ENST00000254998 AKAP17AQ02040 695 aaKnown RBP24.83■■□□□ 1.57
NXT1-201ENST00000254998 GJC2Q5T442 439 aaPredicted RBP24.83■■□□□ 1.57
NXT1-201ENST00000254998 CPLX2Q6PUV4 134 aaKnown RBP24.83■■□□□ 1.57
NXT1-201ENST00000254998 USP17L6PQ6QN14 398 aa24.83■■□□□ 1.57
NXT1-201ENST00000254998 RNF180Q86T96 592 aa24.83■■□□□ 1.57
NXT1-201ENST00000254998 SMARCC2Q8TAQ2 1214 aa24.83■■□□□ 1.57
NXT1-201ENST00000254998 SCFD2Q8WU76 684 aa24.83■■□□□ 1.57
NXT1-201ENST00000254998 PHKBQ93100 1093 aa24.83■■□□□ 1.57
NXT1-201ENST00000254998 HTATIP2Q9BUP3 242 aa24.83■■□□□ 1.57
NXT1-201ENST00000254998 GLT8D2Q9H1C3 349 aa24.83■■□□□ 1.57
NXT1-201ENST00000254998 CPLX1O14810 134 aa24.82■■□□□ 1.56
NXT1-201ENST00000254998 EIF3JO75822 258 aaKnown RBP24.82■■□□□ 1.56
NXT1-201ENST00000254998 SMPD1P17405 629 aa24.82■■□□□ 1.56
NXT1-201ENST00000254998 STK3Q13188 491 aa24.82■■□□□ 1.56
NXT1-201ENST00000254998 PGM5Q15124 567 aa24.82■■□□□ 1.56
NXT1-201ENST00000254998 DUSP28Q4G0W2 176 aa24.82■■□□□ 1.56
NXT1-201ENST00000254998 VSIG10LQ86VR7 867 aa24.82■■□□□ 1.56
NXT1-201ENST00000254998 KLHDC9Q8NEP7 349 aa24.82■■□□□ 1.56
NXT1-201ENST00000254998 TSEN34Q9BSV6 310 aaKnown RBP24.82■■□□□ 1.56
NXT1-201ENST00000254998 WDR11Q9BZH6 1224 aa24.82■■□□□ 1.56
NXT1-201ENST00000254998 SLKQ9H2G2 1235 aaPredicted RBP24.82■■□□□ 1.56
NXT1-201ENST00000254998 SPC25Q9HBM1 224 aa24.82■■□□□ 1.56
NXT1-201ENST00000254998 RIC8AQ9NPQ8 531 aa24.82■■□□□ 1.56
NXT1-201ENST00000254998 SCRN1Q12765 414 aa24.81■■□□□ 1.56
NXT1-201ENST00000254998 TRIM22Q8IYM9 498 aa24.81■■□□□ 1.56
NXT1-201ENST00000254998 SLC26A6Q9BXS9 759 aa24.81■■□□□ 1.56
NXT1-201ENST00000254998 ESYT2A0FGR8 921 aa24.8■■□□□ 1.56
NXT1-201ENST00000254998 NKRFO15226 690 aaKnown RBP eCLIP24.8■■□□□ 1.56
NXT1-201ENST00000254998 CCND2P30279 289 aa24.8■■□□□ 1.56
NXT1-201ENST00000254998 ADCY7P51828 1080 aa24.8■■□□□ 1.56
NXT1-201ENST00000254998 SSRP1Q08945 709 aaKnown RBP24.8■■□□□ 1.56
NXT1-201ENST00000254998 CCSAPQ6IQ19 270 aaPredicted RBP24.8■■□□□ 1.56
NXT1-201ENST00000254998 XRRA1Q6P2D8 792 aa24.8■■□□□ 1.56
NXT1-201ENST00000254998 IL31RAQ8NI17 732 aa24.8■■□□□ 1.56
NXT1-201ENST00000254998 CCDC12Q8WUD4 166 aaPredicted RBP24.8■■□□□ 1.56
NXT1-201ENST00000254998 PHF24Q9UPV7 400 aa24.8■■□□□ 1.56
NXT1-201ENST00000254998 KIAA1217Q5T5P2 1943 aa24.79■■□□□ 1.56
NXT1-201ENST00000254998 CTAGE5O15320 804 aa24.79■■□□□ 1.56
NXT1-201ENST00000254998 CDKL5O76039 1030 aa24.79■■□□□ 1.56
NXT1-201ENST00000254998 TTLL4Q14679 1199 aa24.79■■□□□ 1.56
NXT1-201ENST00000254998 CCDC62Q6P9F0 684 aa24.79■■□□□ 1.56
NXT1-201ENST00000254998 NOL8Q76FK4 1167 aaKnown RBP24.79■■□□□ 1.56
NXT1-201ENST00000254998 TLK2Q86UE8 772 aa24.79■■□□□ 1.56
NXT1-201ENST00000254998 IL27Q8NEV9 243 aa24.79■■□□□ 1.56
NXT1-201ENST00000254998 SMCO2A6NFE2 343 aa24.78■■□□□ 1.56
NXT1-201ENST00000254998 STAM2O75886 525 aa24.78■■□□□ 1.56
NXT1-201ENST00000254998 UBE2SQ16763 222 aa24.78■■□□□ 1.56
NXT1-201ENST00000254998 ME3Q16798 604 aa24.78■■□□□ 1.56
NXT1-201ENST00000254998 ZMYND12Q9H0C1 365 aa24.78■■□□□ 1.56
NXT1-201ENST00000254998 AP5M1Q9H0R1 490 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms