RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 HPCAL4Q9UM19 191 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 ABCC12Q96J65 1359 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 RPSAP08865 295 aaKnown RBP11.61□□□□□ -0.55
USB1-212ENST00000566082 TOB1P50616 345 aaPredicted RBP11.61□□□□□ -0.55
USB1-212ENST00000566082 DPYDQ12882 1025 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 GRIPAP1Q4V328 841 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 ALS2CLQ60I27 953 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 LRRC31Q6UY01 552 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 SPATS2Q86XZ4 545 aaKnown RBP11.61□□□□□ -0.55
USB1-212ENST00000566082 SPATA4Q8NEY3 305 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 MGARPQ8TDB4 240 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 TGFBRAP1Q8WUH2 860 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 IQCDQ96DY2 449 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 LIMA1Q9UHB6 759 aaKnown RBP11.61□□□□□ -0.55
USB1-212ENST00000566082 PCDHA4Q9UN74 947 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 ANO9A1A5B4 782 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 FLOT1O75955 427 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 CLTAP09496 248 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 MAN2A1Q16706 1144 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 PARP10Q53GL7 1025 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 TMTC3Q6ZXV5 915 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 KIFC2Q96AC6 838 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 KCND1Q9NSA2 647 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 INTS13Q9NVM9 706 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 SWAP70Q9UH65 585 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 ADAMTS1Q9UHI8 967 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 APBA1Q02410 837 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 SF3B2Q13435 895 aaKnown RBP11.6□□□□□ -0.55
USB1-212ENST00000566082 TEX11Q8IYF3 940 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 OSBPL9Q96SU4 736 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 SETDB2Q96T68 719 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 TACO1Q9BSH4 297 aaKnown RBP11.6□□□□□ -0.55
USB1-212ENST00000566082 NUCKS1Q9H1E3 243 aaKnown RBP11.6□□□□□ -0.55
USB1-212ENST00000566082 BTG4Q9NY30 223 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 RIPOR2Q9Y4F9 1068 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 ADAMTS13Q76LX8 1427 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 ZNF18P17022 549 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 BMP6P22004 513 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 IFNAR2P48551 515 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 IRAK1P51617 712 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 CCNI2Q6ZMN8 369 aaPredicted RBP11.6□□□□□ -0.55
USB1-212ENST00000566082 MSANTD4Q8NCY6 345 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 U2AF1L4Q8WU68 220 aaKnown RBP11.6□□□□□ -0.55
USB1-212ENST00000566082 CALCOCO2Q13137 446 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 HOOK3Q86VS8 718 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 STMN4Q9H169 189 aaPredicted RBP11.6□□□□□ -0.55
USB1-212ENST00000566082 ARPP21Q9UBL0 812 aaPredicted RBP11.6□□□□□ -0.55
USB1-212ENST00000566082 PCDHB13Q9Y5F0 798 aa11.6□□□□□ -0.55
USB1-212ENST00000566082 PRPHP41219 470 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 GUCY1A3Q02108 690 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 CACNB1Q02641 598 aaPredicted RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 MTMR3Q13615 1198 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 FAM26FQ5R3K3 315 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 HS2ST1Q7LGA3 356 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 ISCA1Q9BUE6 129 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 CPVLQ9H3G5 476 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 VIPAS39Q9H9C1 493 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 EPB41L4AQ9HCS5 686 aaPredicted RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 PREX1Q8TCU6 1659 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 LOC102724159A0A0B4J2E5 919 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 LRRC53A6NM62 1247 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 PPP1R3GB7ZBB8 358 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 KRT14P02533 472 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 RPL13P26373 211 aaKnown RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 GJC1P36383 396 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 CORO7P57737 925 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 ATP2C1P98194 919 aaPredicted RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 GFPT1Q06210 699 aaPredicted RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 PWP2Q15269 919 aaKnown RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 ALX1Q15699 326 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 FAM133AQ8N9E0 248 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 CUL5Q93034 780 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 HPS3Q969F9 1004 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 AP1M1Q9BXS5 423 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 CAPN11Q9UMQ6 739 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 PACSIN2Q9UNF0 486 aaPredicted RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 RGS16O15492 202 aaPredicted RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 EPB41P11171 864 aaKnown RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 ADCY7P51828 1080 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 MRPL12P52815 198 aaKnown RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 TBX2Q13207 712 aaPredicted RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 SNCBQ16143 134 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 ARL6IP4Q66PJ3 421 aaKnown RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 TCP11Q8WWU5 503 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 LARP4BQ92615 738 aaKnown RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 RPGRQ92834 1020 aaKnown RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 ODF2LQ9ULJ1 636 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 NOVA2Q9UNW9 492 aaKnown RBP11.59□□□□□ -0.55
USB1-212ENST00000566082 ATP8A1Q9Y2Q0 1164 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 DUSP10Q9Y6W6 482 aa11.59□□□□□ -0.55
USB1-212ENST00000566082 FAM13AO94988 1023 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 TNFAIP3P21580 790 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 CETN2P41208 172 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 ZRSR2Q15696 482 aaKnown RBP11.58□□□□□ -0.56
USB1-212ENST00000566082 DENND2CQ68D51 928 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 SLF2Q8IX21 1173 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 SNX12Q9UMY4 172 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 STK38LQ9Y2H1 464 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 ITSN1Q15811 1721 aa11.58□□□□□ -0.56
USB1-212ENST00000566082 NEBLO76041 1014 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms