RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 SORBS3O60504 671 aa3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 FZD7O75084 574 aa3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 ZBTB7AO95365 584 aa3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 NME1P15531 152 aaKnown RBP3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 GARTP22102 1010 aa3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 MC3RP41968 323 aa3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 CACNB2Q08289 660 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 BORAQ6PGQ7 559 aa3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 TMEM192Q8IY95 271 aa3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 REXO1Q8N1G1 1221 aaKnown RBP3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 ADAMTS17Q8TE56 1095 aa3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 SMARCC1Q92922 1105 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 ZBTB8AQ96BR9 441 aa3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 SLC6A18Q96N87 628 aa3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 KCNQ5Q9NR82 932 aa3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 TSC22D4Q9Y3Q8 395 aa3.36□□□□□ -1.87
HMGB3P3-201ENST00000510526 ANKRD33BA6NCL7 494 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 MEIS3P2A8K0S8 358 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 GREM1O60565 184 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 GLI4P10075 376 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 PMLP29590 882 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 ACVRL1P37023 503 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 ZEB1P37275 1124 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 EIF4A3P38919 411 aaKnown RBP3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 ZNF165P49910 485 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 SURF1Q15526 300 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 ANKRD39Q53RE8 183 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 FAM26FQ5R3K3 315 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 NOL9Q5SY16 702 aaKnown RBP3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 INTS3Q68E01 1043 aaKnown RBP3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 FBXL19Q6PCT2 694 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 CCDC144CPQ8IYA2 1237 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 NETO2Q8NC67 525 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 SMARCC2Q8TAQ2 1214 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 SCAND2PQ9GZW5 306 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 MRS2Q9HD23 443 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 SUCOQ9UBS9 1254 aaKnown RBP3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 SF3B6Q9Y3B4 125 aaKnown RBP3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 ZNF536O15090 1300 aa3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 ARID4BQ4LE39 1312 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P3-201ENST00000510526 TACR1P25103 407 aa3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 RPL13P26373 211 aaKnown RBP3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 SETQ01105 290 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 POU4F1Q01851 419 aa3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 RGL3Q3MIN7 710 aa3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 CRIP3Q6Q6R5 217 aa3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 LINC00482Q8N8I6 264 aa3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 SH3RF3Q8TEJ3 882 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 PTCHD1Q96NR3 888 aa3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 NAP1L5Q96NT1 182 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 KBTBD4Q9NVX7 518 aa3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 SPATA6Q9NWH7 488 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 PLA2G2DQ9UNK4 145 aa3.34□□□□□ -1.87
HMGB3P3-201ENST00000510526 MROH6A6NGR9 719 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 H0Y8X5 98 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 SLPIP03973 132 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 CYP2C8P10632 490 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 CANXP27824 592 aaKnown RBP3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 GK5Q6ZS86 529 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 ERMP1Q7Z2K6 904 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 TICAM2Q86XR7 235 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 ZFPM1Q8IX07 1006 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 LZTR1Q8N653 840 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 FCRL3Q96P31 734 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 NOX5Q96PH1 765 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 VTI1BQ9UEU0 232 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 INVSQ9Y283 1065 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 FHOD1Q9Y613 1164 aa3.33□□□□□ -1.88
HMGB3P3-201ENST00000510526 A0A087WZG4 1122 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 HMGB1P1B2RPK0 211 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 SHOXO15266 292 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 MCM4P33991 863 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 PMS1P54277 932 aaKnown RBP3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 CLCQ05315 142 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 APOBRQ0VD83 1088 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 SEZ6Q53EL9 994 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 EEF1DP3Q658K8 133 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 SPRED1Q7Z699 444 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 PLEKHH3Q7Z736 793 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 Q8N1X5 172 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 TTLL6Q8N841 843 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 ZNF296Q8WUU4 475 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 SLC9A7Q96T83 725 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 SSBP3Q9BWW4 388 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 VPS11Q9H270 941 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 GP6Q9HCN6 339 aa3.32□□□□□ -1.88
HMGB3P3-201ENST00000510526 C9orf118A6NHY6 69 aa3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 C9IYK1 514 aa3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 E9PSI1 815 aa3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 LAMTOR5O43504 91 aa3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 IGSF3O75054 1194 aa3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 CD3EP07766 207 aa3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 ITGA4P13612 1032 aa3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 NCLP19338 710 aaKnown RBP3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 CD247P20963 164 aa3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 THBS2P35442 1172 aa3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 ZNF445P59923 1031 aa3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 SMAD4Q13485 552 aaKnown RBP3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 CRB2Q5IJ48 1285 aa3.31□□□□□ -1.88
HMGB3P3-201ENST00000510526 RCSD1Q6JBY9 416 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms