RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 PEX26Q7Z412 305 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 ADAT2Q7Z6V5 191 aaKnown RBP11.65□□□□□ -0.54
USB1-212ENST00000566082 CCDC65Q8IXS2 484 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 SYCP3Q8IZU3 236 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 FNBP4Q8N3X1 1017 aaPredicted RBP11.65□□□□□ -0.54
USB1-212ENST00000566082 NSRP1Q9H0G5 558 aaKnown RBP11.65□□□□□ -0.54
USB1-212ENST00000566082 MLXIPQ9HAP2 919 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 LCMT1Q9UIC8 334 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 L1RE1Q9UN81 338 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 PP2D1A8MPX8 630 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 CETN3O15182 167 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 PRPF3O43395 683 aaKnown RBP11.64□□□□□ -0.55
USB1-212ENST00000566082 ADAMTS2O95450 1211 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 OR52Z1P0C646 297 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 KIF11P52732 1056 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 LRRC41Q15345 812 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 CALCRLQ16602 461 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 RSRC2Q7L4I2 434 aaKnown RBP11.64□□□□□ -0.55
USB1-212ENST00000566082 KRT25Q7Z3Z0 450 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 CCDC170Q8IYT3 715 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 AGXT2Q9BYV1 514 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 KCNK9Q9NPC2 374 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 NAA35Q5VZE5 725 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 GPCPD1Q9NPB8 672 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 PSD3Q9NYI0 1048 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 ZBTB1Q9Y2K1 713 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 KIF13AQ9H1H9 1805 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 KNDC1Q76NI1 1749 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 F8W031 263 aaPredicted RBP11.64□□□□□ -0.55
USB1-212ENST00000566082 LDHBP07195 334 aaKnown RBP11.64□□□□□ -0.55
USB1-212ENST00000566082 E2F5Q15329 346 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 HLFQ16534 295 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 NFRKBQ6P4R8 1299 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 CACNA2D3Q8IZS8 1091 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 UHMK1Q8TAS1 419 aaKnown RBP11.64□□□□□ -0.55
USB1-212ENST00000566082 DHTKD1Q96HY7 919 aaPredicted RBP11.64□□□□□ -0.55
USB1-212ENST00000566082 STIM2Q9P246 746 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 RASAL2Q9UJF2 1139 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 UTP11Q9Y3A2 253 aaKnown RBP11.64□□□□□ -0.55
USB1-212ENST00000566082 PCDHA13Q9Y5I0 950 aa11.64□□□□□ -0.55
USB1-212ENST00000566082 A0A1B0GUA9 196 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
USB1-212ENST00000566082 HIBADHP31937 336 aaKnown RBP11.63□□□□□ -0.55
USB1-212ENST00000566082 TRAPPC10P48553 1259 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 CHRNDQ07001 517 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 MCTP2Q6DN12 878 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 REXO1Q8N1G1 1221 aaKnown RBP11.63□□□□□ -0.55
USB1-212ENST00000566082 RETREG2Q8NC44 543 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 DISC1Q9NRI5 854 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 GSG1L2A8MUP6 293 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 C6orf229H3BNL8 230 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 NCK2O43639 380 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 DDAH1O94760 285 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 CCNE1P24864 410 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 HNRNPLLQ8WVV9 542 aaKnown RBP11.63□□□□□ -0.55
USB1-212ENST00000566082 TBC1D5Q92609 795 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 LRRIQ3A6PVS8 624 aaPredicted RBP11.63□□□□□ -0.55
USB1-212ENST00000566082 KRIT1O00522 736 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 NR1D1P20393 614 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 PPP1R7Q15435 360 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 RSRC1Q96IZ7 334 aaKnown RBP11.63□□□□□ -0.55
USB1-212ENST00000566082 ANKZF1Q9H8Y5 726 aa11.63□□□□□ -0.55
USB1-212ENST00000566082 FRMD3A2A2Y4 597 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 CCDC172P0C7W6 258 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
USB1-212ENST00000566082 PLCG1P19174 1290 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 CETN1Q12798 172 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 PAXIP1Q6ZW49 1069 aaPredicted RBP11.62□□□□□ -0.55
USB1-212ENST00000566082 MAPKAPK5Q8IW41 473 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 SH2D3CQ8N5H7 860 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 ENAHQ8N8S7 591 aaPredicted RBP11.62□□□□□ -0.55
USB1-212ENST00000566082 STAG1Q8WVM7 1258 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 A0A0U1RQJ8 604 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 BUB1BO60566 1050 aaPredicted RBP11.62□□□□□ -0.55
USB1-212ENST00000566082 FBXW10Q5XX13 1052 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 MYOCDQ8IZQ8 938 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 ERMNQ8TAM6 284 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 MAP3K14Q99558 947 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 LRRC1Q9BTT6 524 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 THAP9Q9H5L6 903 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 AGPAT5Q9NUQ2 364 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 COL15A1P39059 1388 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 TMEM131LA2VDJ0 1609 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 KLRF2D3W0D1 207 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 ERVK-24P63145 666 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 VWA3BQ502W6 1294 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 EMBQ6PCB8 327 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 FOXR1Q6PIV2 292 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 MTRF1LQ9UGC7 380 aaKnown RBP11.62□□□□□ -0.55
USB1-212ENST00000566082 SALL1Q9NSC2 1324 aa11.62□□□□□ -0.55
USB1-212ENST00000566082 NMT2O60551 498 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 ABCB4P21439 1286 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 GKAP1Q5VSY0 366 aaPredicted RBP11.61□□□□□ -0.55
USB1-212ENST00000566082 NDST4Q9H3R1 872 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 SMARCAL1Q9NZC9 954 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 A0A1W2PRG0 241 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 GSTO1P78417 241 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 PLS1Q14651 629 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 NEK8Q86SG6 692 aa11.61□□□□□ -0.55
USB1-212ENST00000566082 TBC1D31Q96DN5 1066 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms